Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 AKAP8P1-201ENST00000434743 1349 ntBASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 CICP8-201ENST00000455800 2813 ntBASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 RPS8P6-201ENST00000426177 609 ntBASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 AC004967.1-201ENST00000453589 447 ntBASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 AC026120.1-201ENST00000611536 926 ntBASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 AC020765.3-201ENST00000613051 740 ntBASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 AGAP7P-201ENST00000582299 2062 ntBASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 AGAP14-201ENST00000624701 2060 ntBASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
R3HCC1Q9Y3T6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 TFAMP1-201ENST00000412727 736 ntBASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 AL355306.1-201ENST00000415580 579 ntBASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 YBX1P5-201ENST00000509441 847 ntBASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 IGHV3-62-201ENST00000520057 340 ntBASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
R3HCC1Q9Y3T6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms