Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 Z97205.2-201ENST00000564697 1639 ntBASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 RN7SL692P-201ENST00000464677 288 ntBASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 AC004790.1-201ENST00000612686 536 ntBASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 AC007541.1-201ENST00000570282 1469 ntBASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 PIN1P1-201ENST00000412108 996 ntBASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 SPTLC1P1-201ENST00000447199 261 ntBASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 SRD5A3P1-201ENST00000603021 949 ntBASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 AC105917.1-201ENST00000506637 2539 ntBASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPH3AQ9Y2J0 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RPH3AQ9Y2J0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
RPH3AQ9Y2J0 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms