Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
DENND2AQ9ULE3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DENND2AQ9ULE3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DENND2AQ9ULE3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DENND2AQ9ULE3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DENND2AQ9ULE3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
DENND2AQ9ULE3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 AL645937.2-201ENST00000396808 931 ntBASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 ACTBP8-201ENST00000403258 1108 ntBASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 RPL5P21-201ENST00000404620 815 ntBASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 RNA5SP412-201ENST00000516234 123 ntBASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 AL583810.1-201ENST00000553344 1045 ntBASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 AC007787.1-201ENST00000588095 1583 ntBASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.71■□□□□ 0.59
DENND2AQ9ULE3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.71■□□□□ 0.58
DENND2AQ9ULE3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
DENND2AQ9ULE3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.58
DENND2AQ9ULE3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 AL138709.1-201ENST00000614840 1693 ntBASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 AC132938.4-201ENST00000623835 848 ntBASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
DENND2AQ9ULE3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.69■□□□□ 0.58
DENND2AQ9ULE3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DENND2AQ9ULE3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DENND2AQ9ULE3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
DENND2AQ9ULE3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DENND2AQ9ULE3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
DENND2AQ9ULE3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DENND2AQ9ULE3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms