Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 ENPP7P14-201ENST00000621765 1040 ntBASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 PDIA3P1-201ENST00000471856 1510 ntBASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 USB1-202ENST00000423271 1217 ntTSL 2 BASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 RPL7P3-201ENST00000441388 714 ntBASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 AC090340.1-201ENST00000620778 4980 ntBASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC20.61■□□□□ 0.89
NPC1L1Q9UHC9 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 AC006001.1-201ENST00000325130 474 ntBASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 GZMB-202ENST00000382540 816 ntTSL 5 BASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 SERF2-209ENST00000409646 559 ntTSL 4 BASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 MIR1909-201ENST00000411312 80 ntBASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 AC016694.1-201ENST00000434179 700 ntBASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 GPR53P-205ENST00000457298 1084 ntBASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 MESTP3-201ENST00000503460 968 ntBASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 AC004466.1-201ENST00000599515 1080 ntBASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 LARP4-220ENST00000615080 856 ntTSL 5 BASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 ETV2-208ENST00000621247 941 ntTSL 5 BASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 AC023090.2-201ENST00000625182 2110 ntBASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC20.6■□□□□ 0.89
NPC1L1Q9UHC9 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 TCAF2P1-201ENST00000291129 2421 ntBASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms