Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 UXT-AS1-201ENST00000590504 1525 ntBASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 CICP14-201ENST00000629111 2732 ntBASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 PCDHGB8P-201ENST00000502926 1973 ntBASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 FO393414.2-201ENST00000405153 598 ntBASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 MED15P5-201ENST00000423150 992 ntBASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 AC084121.4-201ENST00000641598 221 ntBASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 AF228730.8-201ENST00000642140 221 ntBASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 ACE3P-201ENST00000423435 1973 ntBASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CDC42SE2Q9NRR3 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms