Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AL022318.4-201ENST00000381568 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 TOB2P1-201ENST00000469761 992 ntBASIC18.57■□□□□ 0.56
RTN4Q9NQC3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 AC137549.1-201ENST00000514243 533 ntBASIC18.57■□□□□ 0.56
RTN4Q9NQC3 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 RN7SL819P-201ENST00000581896 270 ntBASIC18.57■□□□□ 0.56
RTN4Q9NQC3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 AL109924.4-201ENST00000623089 670 ntBASIC18.57■□□□□ 0.56
RTN4Q9NQC3 AC073592.4-201ENST00000623827 446 ntBASIC18.57■□□□□ 0.56
RTN4Q9NQC3 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 TSN-212ENST00000536142 3328 ntTSL 2 BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 IRAK4-202ENST00000440781 1409 ntTSL 2 BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 AC131888.1-201ENST00000625028 2168 ntBASIC18.57■□□□□ 0.56
RTN4Q9NQC3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RTN4Q9NQC3 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC18.56■□□□□ 0.56
RTN4Q9NQC3 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RTN4Q9NQC3 REXO1L8P-201ENST00000604378 1897 ntBASIC18.56■□□□□ 0.56
RTN4Q9NQC3 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
RTN4Q9NQC3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC18.56■□□□□ 0.56
RTN4Q9NQC3 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
RTN4Q9NQC3 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RTN4Q9NQC3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTN4Q9NQC3 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RTN4Q9NQC3 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
RTN4Q9NQC3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTN4Q9NQC3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RTN4Q9NQC3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTN4Q9NQC3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RTN4Q9NQC3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.56■□□□□ 0.56
RTN4Q9NQC3 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC18.56■□□□□ 0.56
RTN4Q9NQC3 AP001793.2-201ENST00000580267 780 ntTSL 2 BASIC18.56■□□□□ 0.56
RTN4Q9NQC3 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC18.56■□□□□ 0.56
RTN4Q9NQC3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RTN4Q9NQC3 AC114341.1-201ENST00000618070 349 ntBASIC18.56■□□□□ 0.56
RTN4Q9NQC3 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RTN4Q9NQC3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC18.56■□□□□ 0.56
RTN4Q9NQC3 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTN4Q9NQC3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTN4Q9NQC3 AC005831.1-201ENST00000624384 1697 ntBASIC18.56■□□□□ 0.56
RTN4Q9NQC3 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RTN4Q9NQC3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RTN4Q9NQC3 KRT8P49-201ENST00000604166 1432 ntBASIC18.56■□□□□ 0.56
RTN4Q9NQC3 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTN4Q9NQC3 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTN4Q9NQC3 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC18.56■□□□□ 0.56
RTN4Q9NQC3 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 TRIM36-IT1-201ENST00000503723 881 ntBASIC18.55■□□□□ 0.56
RTN4Q9NQC3 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 MTATP6P25-201ENST00000574491 261 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms