Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 RN7SL828P-201ENST00000607615 303 ntBASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 AL589739.1-201ENST00000607720 493 ntBASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 AC010327.5-201ENST00000586923 3061 ntBASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 AC006504.5-208ENST00000588784 2401 ntBASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 CR383656.2-201ENST00000548656 2254 ntBASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 AC063926.2-201ENST00000623766 1308 ntBASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 MIR648-201ENST00000385046 94 ntBASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 PIN1P1-201ENST00000412108 996 ntBASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 AC105021.1-202ENST00000570572 669 ntBASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 AC027307.3-201ENST00000594262 1100 ntBASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 TEX28P1-201ENST00000613479 1221 ntBASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 TEX28P2-201ENST00000617764 1221 ntBASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
TRAF4Q9BUZ4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms