Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.04□□□□□ -0.32
CCL13Q99616 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CCL13Q99616 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL13Q99616 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL13Q99616 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL13Q99616 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.04□□□□□ -0.32
CCL13Q99616 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL13Q99616 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL13Q99616 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL13Q99616 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.04□□□□□ -0.32
CCL13Q99616 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL13Q99616 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL13Q99616 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CCL13Q99616 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.04□□□□□ -0.32
CCL13Q99616 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL13Q99616 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.04□□□□□ -0.32
CCL13Q99616 AL133267.1-201ENST00000398220 340 ntBASIC13.04□□□□□ -0.32
CCL13Q99616 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL13Q99616 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.04□□□□□ -0.32
CCL13Q99616 DFFBP1-201ENST00000433250 979 ntBASIC13.04□□□□□ -0.32
CCL13Q99616 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL13Q99616 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.04□□□□□ -0.32
CCL13Q99616 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.04□□□□□ -0.32
CCL13Q99616 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.04□□□□□ -0.32
CCL13Q99616 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL13Q99616 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.04□□□□□ -0.32
CCL13Q99616 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.04□□□□□ -0.32
CCL13Q99616 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL13Q99616 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL13Q99616 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL13Q99616 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CCL13Q99616 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.04□□□□□ -0.32
CCL13Q99616 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL13Q99616 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL13Q99616 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL13Q99616 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL13Q99616 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.04□□□□□ -0.32
CCL13Q99616 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL13Q99616 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL13Q99616 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
CCL13Q99616 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL13Q99616 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL13Q99616 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL13Q99616 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CCL13Q99616 SLC7A15P-201ENST00000424028 1363 ntBASIC13.04□□□□□ -0.32
CCL13Q99616 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL13Q99616 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL13Q99616 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL13Q99616 AP002414.2-201ENST00000591780 3365 ntBASIC13.04□□□□□ -0.32
CCL13Q99616 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
CCL13Q99616 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL13Q99616 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL13Q99616 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL13Q99616 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CCL13Q99616 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL13Q99616 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL13Q99616 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL13Q99616 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL13Q99616 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL13Q99616 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CCL13Q99616 AC046158.3-201ENST00000624947 2558 ntBASIC13.03□□□□□ -0.32
CCL13Q99616 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL13Q99616 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.03□□□□□ -0.32
CCL13Q99616 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL13Q99616 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL13Q99616 PIN1P1-201ENST00000412108 996 ntBASIC13.03□□□□□ -0.32
CCL13Q99616 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL13Q99616 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CCL13Q99616 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL13Q99616 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CCL13Q99616 AC055876.2-201ENST00000531834 546 ntBASIC13.03□□□□□ -0.32
CCL13Q99616 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL13Q99616 AC036164.1-201ENST00000570544 333 ntBASIC13.03□□□□□ -0.32
CCL13Q99616 AC138761.1-201ENST00000584393 385 ntBASIC13.03□□□□□ -0.32
CCL13Q99616 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL13Q99616 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL13Q99616 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CCL13Q99616 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.03□□□□□ -0.32
CCL13Q99616 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL13Q99616 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CCL13Q99616 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL13Q99616 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.03□□□□□ -0.32
CCL13Q99616 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL13Q99616 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL13Q99616 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CCL13Q99616 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.03□□□□□ -0.32
CCL13Q99616 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL13Q99616 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL13Q99616 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CCL13Q99616 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL13Q99616 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CCL13Q99616 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CCL13Q99616 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CCL13Q99616 AC084364.1-201ENST00000551967 1556 ntBASIC13.03□□□□□ -0.32
CCL13Q99616 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CCL13Q99616 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.02□□□□□ -0.32
CCL13Q99616 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CCL13Q99616 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CCL13Q99616 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CCL13Q99616 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms