Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 KRT18P64-201ENST00000434946 1219 ntBASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 AC004967.1-201ENST00000453589 447 ntBASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 RARRES2P9-201ENST00000565168 469 ntBASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 BX640514.1-201ENST00000583223 1918 ntBASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 RPSAP43-201ENST00000402237 625 ntBASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 FAM8A3P-201ENST00000427218 844 ntBASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHAMP1Q96JM3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 AC010327.5-201ENST00000586923 3061 ntBASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CHAMP1Q96JM3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms