Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 AL583810.1-201ENST00000553344 1045 ntBASIC16.81■□□□□ 0.28
PGBD4Q96DM1 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 RHOXF1P1-202ENST00000635473 501 ntBASIC16.81■□□□□ 0.28
PGBD4Q96DM1 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 AC112504.1-201ENST00000623415 1841 ntBASIC16.8■□□□□ 0.28
PGBD4Q96DM1 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 KRT90P-201ENST00000549264 1064 ntBASIC16.8■□□□□ 0.28
PGBD4Q96DM1 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 AC025181.2-201ENST00000606994 802 ntBASIC16.8■□□□□ 0.28
PGBD4Q96DM1 AC244669.2-201ENST00000612320 853 ntBASIC16.8■□□□□ 0.28
PGBD4Q96DM1 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.8■□□□□ 0.28
PGBD4Q96DM1 PAUPAR-201ENST00000630360 2965 ntBASIC16.8■□□□□ 0.28
PGBD4Q96DM1 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PGBD4Q96DM1 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.79■□□□□ 0.28
PGBD4Q96DM1 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PGBD4Q96DM1 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PGBD4Q96DM1 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.79■□□□□ 0.28
PGBD4Q96DM1 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
PGBD4Q96DM1 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PGBD4Q96DM1 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PGBD4Q96DM1 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PGBD4Q96DM1 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PGBD4Q96DM1 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PGBD4Q96DM1 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PGBD4Q96DM1 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PGBD4Q96DM1 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PGBD4Q96DM1 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PGBD4Q96DM1 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PGBD4Q96DM1 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PGBD4Q96DM1 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PGBD4Q96DM1 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.79■□□□□ 0.28
PGBD4Q96DM1 NUS1P3-201ENST00000423502 862 ntBASIC16.79■□□□□ 0.28
PGBD4Q96DM1 YBX1P6-201ENST00000442962 1002 ntBASIC16.79■□□□□ 0.28
PGBD4Q96DM1 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.79■□□□□ 0.28
PGBD4Q96DM1 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.79■□□□□ 0.28
PGBD4Q96DM1 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.79■□□□□ 0.28
PGBD4Q96DM1 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PGBD4Q96DM1 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms