Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
CPNE4Q96A23 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CPNE4Q96A23 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CPNE4Q96A23 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14□□□□□ -0.17
CPNE4Q96A23 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CPNE4Q96A23 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CPNE4Q96A23 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CPNE4Q96A23 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14□□□□□ -0.17
CPNE4Q96A23 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14□□□□□ -0.17
CPNE4Q96A23 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CPNE4Q96A23 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CPNE4Q96A23 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CPNE4Q96A23 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CPNE4Q96A23 AC127383.1-201ENST00000444697 1800 ntBASIC14□□□□□ -0.17
CPNE4Q96A23 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
CPNE4Q96A23 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14□□□□□ -0.17
CPNE4Q96A23 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CPNE4Q96A23 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14□□□□□ -0.17
CPNE4Q96A23 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CPNE4Q96A23 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
CPNE4Q96A23 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14□□□□□ -0.17
CPNE4Q96A23 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CPNE4Q96A23 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14□□□□□ -0.17
CPNE4Q96A23 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14□□□□□ -0.17
CPNE4Q96A23 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14□□□□□ -0.17
CPNE4Q96A23 AC123567.1-201ENST00000548294 1261 ntBASIC14□□□□□ -0.17
CPNE4Q96A23 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
CPNE4Q96A23 TP53TG3HP-202ENST00000569755 579 ntBASIC14□□□□□ -0.17
CPNE4Q96A23 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14□□□□□ -0.17
CPNE4Q96A23 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14□□□□□ -0.17
CPNE4Q96A23 AC007431.3-201ENST00000623221 587 ntBASIC14□□□□□ -0.17
CPNE4Q96A23 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CPNE4Q96A23 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CPNE4Q96A23 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14□□□□□ -0.17
CPNE4Q96A23 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CPNE4Q96A23 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14□□□□□ -0.17
CPNE4Q96A23 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
CPNE4Q96A23 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14□□□□□ -0.17
CPNE4Q96A23 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CPNE4Q96A23 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CPNE4Q96A23 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.99□□□□□ -0.17
CPNE4Q96A23 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CPNE4Q96A23 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CPNE4Q96A23 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CPNE4Q96A23 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CPNE4Q96A23 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.99□□□□□ -0.17
CPNE4Q96A23 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.99□□□□□ -0.17
CPNE4Q96A23 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CPNE4Q96A23 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.99□□□□□ -0.17
CPNE4Q96A23 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CPNE4Q96A23 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CPNE4Q96A23 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CPNE4Q96A23 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.99□□□□□ -0.17
CPNE4Q96A23 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.99□□□□□ -0.17
CPNE4Q96A23 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.99□□□□□ -0.17
CPNE4Q96A23 COX20P2-201ENST00000452636 358 ntBASIC13.99□□□□□ -0.17
CPNE4Q96A23 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CPNE4Q96A23 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.99□□□□□ -0.17
CPNE4Q96A23 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.99□□□□□ -0.17
CPNE4Q96A23 FAM86LP-201ENST00000478302 853 ntBASIC13.99□□□□□ -0.17
CPNE4Q96A23 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CPNE4Q96A23 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.99□□□□□ -0.17
CPNE4Q96A23 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
CPNE4Q96A23 LINC02084-201ENST00000606069 1096 ntBASIC13.99□□□□□ -0.17
CPNE4Q96A23 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CPNE4Q96A23 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.99□□□□□ -0.17
CPNE4Q96A23 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.99□□□□□ -0.17
CPNE4Q96A23 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CPNE4Q96A23 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CPNE4Q96A23 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CPNE4Q96A23 PAUPAR-201ENST00000630360 2965 ntBASIC13.99□□□□□ -0.17
CPNE4Q96A23 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CPNE4Q96A23 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CPNE4Q96A23 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
CPNE4Q96A23 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.99□□□□□ -0.17
CPNE4Q96A23 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CPNE4Q96A23 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CPNE4Q96A23 CLK3P2-201ENST00000427566 1453 ntBASIC13.99□□□□□ -0.17
CPNE4Q96A23 CICP13-201ENST00000422015 2789 ntBASIC13.99□□□□□ -0.17
CPNE4Q96A23 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CPNE4Q96A23 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPNE4Q96A23 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPNE4Q96A23 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPNE4Q96A23 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CPNE4Q96A23 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CPNE4Q96A23 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPNE4Q96A23 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CPNE4Q96A23 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPNE4Q96A23 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CPNE4Q96A23 AC105917.1-201ENST00000506637 2539 ntBASIC13.98□□□□□ -0.17
CPNE4Q96A23 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
CPNE4Q96A23 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPNE4Q96A23 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPNE4Q96A23 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
CPNE4Q96A23 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPNE4Q96A23 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPNE4Q96A23 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CPNE4Q96A23 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPNE4Q96A23 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.98□□□□□ -0.17
CPNE4Q96A23 AL035633.1-201ENST00000406139 838 ntBASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms