Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHC3Q92529 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
SHC3Q92529 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHC3Q92529 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHC3Q92529 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHC3Q92529 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SHC3Q92529 AC012508.2-201ENST00000567613 1472 ntBASIC16.54■□□□□ 0.24
SHC3Q92529 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.54■□□□□ 0.24
SHC3Q92529 AP002414.2-201ENST00000591780 3365 ntBASIC16.54■□□□□ 0.24
SHC3Q92529 REXO1L2P-201ENST00000425429 2069 ntBASIC16.54■□□□□ 0.24
SHC3Q92529 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHC3Q92529 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHC3Q92529 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHC3Q92529 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SHC3Q92529 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHC3Q92529 ACE3P-201ENST00000423435 1973 ntBASIC16.53■□□□□ 0.24
SHC3Q92529 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SHC3Q92529 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHC3Q92529 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHC3Q92529 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHC3Q92529 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHC3Q92529 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHC3Q92529 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHC3Q92529 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHC3Q92529 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHC3Q92529 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.53■□□□□ 0.24
SHC3Q92529 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SHC3Q92529 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.53■□□□□ 0.24
SHC3Q92529 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.53■□□□□ 0.24
SHC3Q92529 DOC2GP-202ENST00000514950 1163 ntBASIC16.53■□□□□ 0.24
SHC3Q92529 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.53■□□□□ 0.24
SHC3Q92529 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.53■□□□□ 0.24
SHC3Q92529 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.53■□□□□ 0.24
SHC3Q92529 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.53■□□□□ 0.24
SHC3Q92529 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.53■□□□□ 0.24
SHC3Q92529 AC023310.3-201ENST00000557027 670 ntBASIC16.53■□□□□ 0.24
SHC3Q92529 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.53■□□□□ 0.24
SHC3Q92529 AC100756.1-201ENST00000562736 682 ntBASIC16.53■□□□□ 0.24
SHC3Q92529 AC138749.3-201ENST00000567691 622 ntBASIC16.53■□□□□ 0.24
SHC3Q92529 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.53■□□□□ 0.24
SHC3Q92529 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHC3Q92529 AC116165.1-201ENST00000611806 668 ntBASIC16.53■□□□□ 0.24
SHC3Q92529 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.53■□□□□ 0.24
SHC3Q92529 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.53■□□□□ 0.24
SHC3Q92529 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHC3Q92529 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHC3Q92529 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHC3Q92529 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHC3Q92529 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHC3Q92529 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHC3Q92529 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHC3Q92529 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHC3Q92529 AJ011931.1-201ENST00000618749 2492 ntBASIC16.53■□□□□ 0.24
SHC3Q92529 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHC3Q92529 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHC3Q92529 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHC3Q92529 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHC3Q92529 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
SHC3Q92529 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHC3Q92529 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHC3Q92529 LINC01101-201ENST00000622953 1884 ntBASIC16.52■□□□□ 0.24
SHC3Q92529 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SHC3Q92529 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
SHC3Q92529 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.52■□□□□ 0.24
SHC3Q92529 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SHC3Q92529 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHC3Q92529 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHC3Q92529 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SHC3Q92529 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.52■□□□□ 0.24
SHC3Q92529 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHC3Q92529 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.52■□□□□ 0.24
SHC3Q92529 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHC3Q92529 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.52■□□□□ 0.24
SHC3Q92529 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SHC3Q92529 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
SHC3Q92529 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHC3Q92529 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
SHC3Q92529 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.52■□□□□ 0.24
SHC3Q92529 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.52■□□□□ 0.24
SHC3Q92529 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SHC3Q92529 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.52■□□□□ 0.24
SHC3Q92529 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.52■□□□□ 0.24
SHC3Q92529 RNA5SP421-201ENST00000516864 134 ntBASIC16.52■□□□□ 0.24
SHC3Q92529 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.52■□□□□ 0.24
SHC3Q92529 AC036164.1-201ENST00000570544 333 ntBASIC16.52■□□□□ 0.24
SHC3Q92529 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.52■□□□□ 0.24
SHC3Q92529 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SHC3Q92529 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SHC3Q92529 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SHC3Q92529 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SHC3Q92529 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.52■□□□□ 0.23
SHC3Q92529 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SHC3Q92529 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
SHC3Q92529 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SHC3Q92529 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SHC3Q92529 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.52■□□□□ 0.23
SHC3Q92529 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SHC3Q92529 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
SHC3Q92529 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SHC3Q92529 AC013726.1-201ENST00000563747 2285 ntBASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms