Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 BNIP3P1-202ENST00000550043 1585 ntBASIC11.68□□□□□ -0.54
NUP35Q8NFH5 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 MSRA-206ENST00000521209 814 ntTSL 3 BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 AP002414.4-201ENST00000589764 1148 ntBASIC11.68□□□□□ -0.54
NUP35Q8NFH5 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 ABR-205ENST00000544583 5595 ntTSL 2 BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 GALC-206ENST00000544807 2528 ntTSL 2 BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC11.68□□□□□ -0.54
NUP35Q8NFH5 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 AC099521.3-201ENST00000624251 2938 ntBASIC11.67□□□□□ -0.54
NUP35Q8NFH5 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 FXN-203ENST00000396366 922 ntTSL 2 BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 HMGA1P7-201ENST00000406908 502 ntBASIC11.67□□□□□ -0.54
NUP35Q8NFH5 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 AC022616.7-201ENST00000525383 220 ntBASIC11.67□□□□□ -0.54
NUP35Q8NFH5 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 AC002347.1-201ENST00000569543 541 ntBASIC11.67□□□□□ -0.54
NUP35Q8NFH5 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 AC099336.1-202ENST00000602961 463 ntBASIC11.67□□□□□ -0.54
NUP35Q8NFH5 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NUP35Q8NFH5 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
NUP35Q8NFH5 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NUP35Q8NFH5 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
NUP35Q8NFH5 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC11.66□□□□□ -0.54
NUP35Q8NFH5 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
NUP35Q8NFH5 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC11.66□□□□□ -0.54
NUP35Q8NFH5 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC11.66□□□□□ -0.54
NUP35Q8NFH5 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
NUP35Q8NFH5 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms