Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCNYL1Q8N7R7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCNYL1Q8N7R7 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCNYL1Q8N7R7 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCNYL1Q8N7R7 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
CCNYL1Q8N7R7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCNYL1Q8N7R7 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CCNYL1Q8N7R7 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCNYL1Q8N7R7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCNYL1Q8N7R7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.43■□□□□ 0.06
CCNYL1Q8N7R7 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCNYL1Q8N7R7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.43■□□□□ 0.06
CCNYL1Q8N7R7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.43■□□□□ 0.06
CCNYL1Q8N7R7 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 AZGP1P1-201ENST00000411909 902 ntBASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 FGD5P1-202ENST00000614866 2498 ntBASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.42■□□□□ 0.06
CCNYL1Q8N7R7 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 YBX2P1-201ENST00000394192 760 ntBASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 AL592309.1-201ENST00000443127 649 ntBASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 FDX1P1-201ENST00000449115 551 ntBASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 AC026748.1-201ENST00000624349 3251 ntBASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 LINC00552-201ENST00000625151 2579 ntBASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms