Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 PMS2P2-201ENST00000425039 1128 ntBASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 RPL13P2-201ENST00000440687 659 ntBASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.71□□□□□ -0.06
CCDC116Q8IYX3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC116Q8IYX3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.71□□□□□ -0.06
CCDC116Q8IYX3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC116Q8IYX3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
CCDC116Q8IYX3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC116Q8IYX3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC116Q8IYX3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC116Q8IYX3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC116Q8IYX3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.06
CCDC116Q8IYX3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 AC084364.1-201ENST00000551967 1556 ntBASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 AL512638.1-201ENST00000457493 794 ntBASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 ZNF890P-202ENST00000530367 1156 ntBASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 AC091951.1-201ENST00000512854 2465 ntBASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC116Q8IYX3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 RFPL4AP1-201ENST00000530883 850 ntBASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 TIMM17BP1-201ENST00000545713 516 ntBASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 AC009407.1-201ENST00000568958 598 ntBASIC14.69□□□□□ -0.06
CCDC116Q8IYX3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms