Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
CCDC50Q8IVM0 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CCDC50Q8IVM0 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC50Q8IVM0 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CCDC50Q8IVM0 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC50Q8IVM0 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC50Q8IVM0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC50Q8IVM0 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC50Q8IVM0 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC50Q8IVM0 CICP24-201ENST00000605464 2705 ntBASIC16.51■□□□□ 0.23
CCDC50Q8IVM0 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CCDC50Q8IVM0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC50Q8IVM0 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 LINC00528-201ENST00000600723 2160 ntBASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CCDC50Q8IVM0 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 EEF1DP4-201ENST00000446006 880 ntBASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 AC005829.1-201ENST00000570002 483 ntBASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 AC022145.2-201ENST00000598203 171 ntBASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 AC084121.4-201ENST00000641598 221 ntBASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 AF228730.8-201ENST00000642140 221 ntBASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC50Q8IVM0 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.48■□□□□ 0.23
CCDC50Q8IVM0 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CCDC50Q8IVM0 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.48■□□□□ 0.23
CCDC50Q8IVM0 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CCDC50Q8IVM0 AC139749.1-202ENST00000617529 3139 ntBASIC16.48■□□□□ 0.23
CCDC50Q8IVM0 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC50Q8IVM0 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC50Q8IVM0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC50Q8IVM0 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms