Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 POM121L3P-201ENST00000419331 1163 ntBASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 AL139424.1-201ENST00000607572 797 ntBASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CROCCP3Q8IVE0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 TERF1P1-201ENST00000311003 1181 ntBASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 CHCHD2P8-201ENST00000429873 447 ntBASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 NTF6B-201ENST00000591913 560 ntBASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 BNIP3P18-201ENST00000593976 575 ntBASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 AC015802.1-201ENST00000588104 1449 ntBASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CROCCP3Q8IVE0 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
CROCCP3Q8IVE0 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms