Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.79■□□□□ 0.12
PACS2Q86VP3 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PACS2Q86VP3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PACS2Q86VP3 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PACS2Q86VP3 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PACS2Q86VP3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PACS2Q86VP3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PACS2Q86VP3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.79■□□□□ 0.12
PACS2Q86VP3 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC15.79■□□□□ 0.12
PACS2Q86VP3 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.78■□□□□ 0.12
PACS2Q86VP3 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC15.78■□□□□ 0.12
PACS2Q86VP3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PACS2Q86VP3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PACS2Q86VP3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PACS2Q86VP3 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PACS2Q86VP3 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PACS2Q86VP3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PACS2Q86VP3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PACS2Q86VP3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.78■□□□□ 0.12
PACS2Q86VP3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PACS2Q86VP3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PACS2Q86VP3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PACS2Q86VP3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PACS2Q86VP3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PACS2Q86VP3 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC15.78■□□□□ 0.12
PACS2Q86VP3 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
PACS2Q86VP3 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
PACS2Q86VP3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PACS2Q86VP3 C20orf85-201ENST00000371168 803 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PACS2Q86VP3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.78■□□□□ 0.12
PACS2Q86VP3 AC073621.1-201ENST00000392730 636 ntBASIC15.78■□□□□ 0.12
PACS2Q86VP3 PSAT1P2-201ENST00000426107 972 ntBASIC15.78■□□□□ 0.12
PACS2Q86VP3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.78■□□□□ 0.12
PACS2Q86VP3 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC15.78■□□□□ 0.12
PACS2Q86VP3 IGHV3-22-201ENST00000520721 359 ntBASIC15.78■□□□□ 0.12
PACS2Q86VP3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.78■□□□□ 0.12
PACS2Q86VP3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.78■□□□□ 0.12
PACS2Q86VP3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.78■□□□□ 0.12
PACS2Q86VP3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.78■□□□□ 0.12
PACS2Q86VP3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.78■□□□□ 0.12
PACS2Q86VP3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.78■□□□□ 0.12
PACS2Q86VP3 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PACS2Q86VP3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PACS2Q86VP3 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PACS2Q86VP3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.78■□□□□ 0.12
PACS2Q86VP3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PACS2Q86VP3 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PACS2Q86VP3 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PACS2Q86VP3 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC15.78■□□□□ 0.12
PACS2Q86VP3 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PACS2Q86VP3 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PACS2Q86VP3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PACS2Q86VP3 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC15.77■□□□□ 0.12
PACS2Q86VP3 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC15.77■□□□□ 0.12
PACS2Q86VP3 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PACS2Q86VP3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.77■□□□□ 0.12
PACS2Q86VP3 AL031731.1-201ENST00000642131 2094 ntBASIC15.77■□□□□ 0.12
PACS2Q86VP3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PACS2Q86VP3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PACS2Q86VP3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
PACS2Q86VP3 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.77■□□□□ 0.12
PACS2Q86VP3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PACS2Q86VP3 SBF1P1-201ENST00000444527 5631 ntBASIC15.77■□□□□ 0.12
PACS2Q86VP3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PACS2Q86VP3 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.12
PACS2Q86VP3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
PACS2Q86VP3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PACS2Q86VP3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PACS2Q86VP3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
PACS2Q86VP3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.77■□□□□ 0.12
PACS2Q86VP3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.77■□□□□ 0.12
PACS2Q86VP3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PACS2Q86VP3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.77■□□□□ 0.12
PACS2Q86VP3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.77■□□□□ 0.12
PACS2Q86VP3 POU5F1P6-201ENST00000466990 990 ntBASIC15.77■□□□□ 0.12
PACS2Q86VP3 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.77■□□□□ 0.12
PACS2Q86VP3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PACS2Q86VP3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.77■□□□□ 0.12
PACS2Q86VP3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.77■□□□□ 0.12
PACS2Q86VP3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.12
PACS2Q86VP3 AL353135.1-201ENST00000606729 504 ntBASIC15.77■□□□□ 0.12
PACS2Q86VP3 AC117500.6-201ENST00000624871 588 ntBASIC15.77■□□□□ 0.12
PACS2Q86VP3 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC15.77■□□□□ 0.12
PACS2Q86VP3 AF228730.7-201ENST00000641842 219 ntBASIC15.77■□□□□ 0.12
PACS2Q86VP3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.77■□□□□ 0.11
PACS2Q86VP3 AC006504.4-201ENST00000592118 1568 ntBASIC15.77■□□□□ 0.11
PACS2Q86VP3 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PACS2Q86VP3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PACS2Q86VP3 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PACS2Q86VP3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PACS2Q86VP3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PACS2Q86VP3 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PACS2Q86VP3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PACS2Q86VP3 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PACS2Q86VP3 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PACS2Q86VP3 AMT-221ENST00000538581 2038 ntTSL 2 BASIC15.77■□□□□ 0.11
PACS2Q86VP3 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PACS2Q86VP3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PACS2Q86VP3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.77■□□□□ 0.11
PACS2Q86VP3 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms