Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PCGF3-213ENST00000620529 1899 ntBASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXR1Q6PIV2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
FOXR1Q6PIV2 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 AC129492.6-201ENST00000611383 1305 ntBASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 AC005562.1-201ENST00000583030 3219 ntBASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 PMS2P4-201ENST00000412466 1052 ntBASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 AC067863.1-201ENST00000494933 530 ntBASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 RNA5SP421-201ENST00000516864 134 ntBASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 FAM86C2P-203ENST00000528684 1004 ntBASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 AC009093.7-201ENST00000623853 1223 ntBASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.3■□□□□ 0.2
FOXR1Q6PIV2 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms