Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 AC126365.1-201ENST00000578585 1514 ntBASIC15.94■□□□□ 0.14
CASC4Q6P4E1 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 AC023024.2-201ENST00000623561 1993 ntBASIC15.93■□□□□ 0.14
CASC4Q6P4E1 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 KRT8P44-201ENST00000441609 1350 ntBASIC15.93■□□□□ 0.14
CASC4Q6P4E1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 AC093520.2-201ENST00000561830 333 ntBASIC15.93■□□□□ 0.14
CASC4Q6P4E1 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 AC004835.2-201ENST00000603762 682 ntBASIC15.93■□□□□ 0.14
CASC4Q6P4E1 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CASC4Q6P4E1 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 AC136604.1-201ENST00000418535 575 ntBASIC15.92■□□□□ 0.14
CASC4Q6P4E1 AP000347.1-202ENST00000435868 847 ntBASIC15.92■□□□□ 0.14
CASC4Q6P4E1 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 YBX1P5-201ENST00000509441 847 ntBASIC15.92■□□□□ 0.14
CASC4Q6P4E1 AP000344.2-201ENST00000512987 629 ntBASIC15.92■□□□□ 0.14
CASC4Q6P4E1 BANF1P1-201ENST00000553684 263 ntBASIC15.92■□□□□ 0.14
CASC4Q6P4E1 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CASC4Q6P4E1 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms