Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC124067.4-201ENST00000519691 2379 ntBASIC15.1■□□□□ 0.01
LYSMD4Q5XG99 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 AC091046.1-201ENST00000331871 207 ntBASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 AL136309.1-201ENST00000403917 691 ntBASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 AC100850.1-201ENST00000506768 649 ntBASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 AC022217.1-201ENST00000521069 738 ntBASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 AC106820.3-201ENST00000561653 397 ntBASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 RN7SL774P-201ENST00000577467 290 ntBASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 U62317.3-201ENST00000608319 855 ntBASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 AC100757.4-201ENST00000626934 759 ntBASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.09■□□□□ 0.01
LYSMD4Q5XG99 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LYSMD4Q5XG99 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LYSMD4Q5XG99 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
LYSMD4Q5XG99 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
LYSMD4Q5XG99 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.08■□□□□ 0.01
LYSMD4Q5XG99 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.08■□□□□ 0.01
LYSMD4Q5XG99 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LYSMD4Q5XG99 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LYSMD4Q5XG99 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.08■□□□□ 0
LYSMD4Q5XG99 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.08■□□□□ 0
LYSMD4Q5XG99 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LYSMD4Q5XG99 AL596087.1-201ENST00000400979 1969 ntBASIC15.08■□□□□ 0
LYSMD4Q5XG99 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.08■□□□□ 0
LYSMD4Q5XG99 AC005332.8-201ENST00000622750 2735 ntBASIC15.08■□□□□ 0
LYSMD4Q5XG99 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.08■□□□□ 0
LYSMD4Q5XG99 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.08■□□□□ 0
LYSMD4Q5XG99 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LYSMD4Q5XG99 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LYSMD4Q5XG99 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.08■□□□□ 0
LYSMD4Q5XG99 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.08■□□□□ 0
LYSMD4Q5XG99 CHMP1AP1-201ENST00000445563 662 ntBASIC15.08■□□□□ 0
LYSMD4Q5XG99 FTLP1-201ENST00000449155 526 ntBASIC15.08■□□□□ 0
LYSMD4Q5XG99 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.08■□□□□ 0
LYSMD4Q5XG99 AC134698.3-201ENST00000523880 214 ntBASIC15.08■□□□□ 0
LYSMD4Q5XG99 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.08■□□□□ 0
LYSMD4Q5XG99 SAMD11P1-201ENST00000571429 661 ntBASIC15.08■□□□□ 0
LYSMD4Q5XG99 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.08■□□□□ 0
LYSMD4Q5XG99 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.08■□□□□ 0
LYSMD4Q5XG99 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
LYSMD4Q5XG99 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
LYSMD4Q5XG99 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
LYSMD4Q5XG99 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
LYSMD4Q5XG99 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.08■□□□□ 0
LYSMD4Q5XG99 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
LYSMD4Q5XG99 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LYSMD4Q5XG99 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LYSMD4Q5XG99 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
LYSMD4Q5XG99 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
LYSMD4Q5XG99 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
LYSMD4Q5XG99 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.08■□□□□ 0
LYSMD4Q5XG99 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.08■□□□□ 0
LYSMD4Q5XG99 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LYSMD4Q5XG99 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.08■□□□□ 0
LYSMD4Q5XG99 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LYSMD4Q5XG99 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LYSMD4Q5XG99 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
LYSMD4Q5XG99 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LYSMD4Q5XG99 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms