Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USH1GQ495M9 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USH1GQ495M9 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
USH1GQ495M9 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USH1GQ495M9 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.8■□□□□ 0.44
USH1GQ495M9 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
USH1GQ495M9 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.8■□□□□ 0.44
USH1GQ495M9 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USH1GQ495M9 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USH1GQ495M9 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
USH1GQ495M9 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
USH1GQ495M9 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.79■□□□□ 0.44
USH1GQ495M9 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.79■□□□□ 0.44
USH1GQ495M9 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USH1GQ495M9 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
USH1GQ495M9 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
USH1GQ495M9 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USH1GQ495M9 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.79■□□□□ 0.44
USH1GQ495M9 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USH1GQ495M9 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
USH1GQ495M9 BOLA2P3-201ENST00000404566 256 ntBASIC17.79■□□□□ 0.44
USH1GQ495M9 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
USH1GQ495M9 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.79■□□□□ 0.44
USH1GQ495M9 KRT223P-202ENST00000449164 1292 ntBASIC17.79■□□□□ 0.44
USH1GQ495M9 FTH1P14-201ENST00000482930 551 ntBASIC17.79■□□□□ 0.44
USH1GQ495M9 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.79■□□□□ 0.44
USH1GQ495M9 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.79■□□□□ 0.44
USH1GQ495M9 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.79■□□□□ 0.44
USH1GQ495M9 AC133552.6-201ENST00000613406 534 ntBASIC17.79■□□□□ 0.44
USH1GQ495M9 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
USH1GQ495M9 COX11-210ENST00000639671 696 ntBASIC17.79■□□□□ 0.44
USH1GQ495M9 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USH1GQ495M9 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.79■□□□□ 0.44
USH1GQ495M9 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.79■□□□□ 0.44
USH1GQ495M9 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USH1GQ495M9 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.79■□□□□ 0.44
USH1GQ495M9 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USH1GQ495M9 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
USH1GQ495M9 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.79■□□□□ 0.44
USH1GQ495M9 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
USH1GQ495M9 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USH1GQ495M9 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USH1GQ495M9 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USH1GQ495M9 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.78■□□□□ 0.44
USH1GQ495M9 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USH1GQ495M9 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.78■□□□□ 0.44
USH1GQ495M9 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USH1GQ495M9 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USH1GQ495M9 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.78■□□□□ 0.44
USH1GQ495M9 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USH1GQ495M9 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USH1GQ495M9 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USH1GQ495M9 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USH1GQ495M9 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USH1GQ495M9 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USH1GQ495M9 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.78■□□□□ 0.44
USH1GQ495M9 AC092933.1-201ENST00000393644 945 ntBASIC17.78■□□□□ 0.44
USH1GQ495M9 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.78■□□□□ 0.44
USH1GQ495M9 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.78■□□□□ 0.44
USH1GQ495M9 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
USH1GQ495M9 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.78■□□□□ 0.44
USH1GQ495M9 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.78■□□□□ 0.44
USH1GQ495M9 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.78■□□□□ 0.44
USH1GQ495M9 BX539320.1-201ENST00000623759 877 ntBASIC17.78■□□□□ 0.44
USH1GQ495M9 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USH1GQ495M9 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USH1GQ495M9 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.78■□□□□ 0.44
USH1GQ495M9 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USH1GQ495M9 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USH1GQ495M9 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.78■□□□□ 0.44
USH1GQ495M9 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USH1GQ495M9 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
USH1GQ495M9 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.78■□□□□ 0.44
USH1GQ495M9 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USH1GQ495M9 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USH1GQ495M9 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USH1GQ495M9 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USH1GQ495M9 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USH1GQ495M9 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USH1GQ495M9 AC105250.1-201ENST00000509378 2057 ntBASIC17.78■□□□□ 0.44
USH1GQ495M9 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
USH1GQ495M9 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USH1GQ495M9 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USH1GQ495M9 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
USH1GQ495M9 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USH1GQ495M9 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
USH1GQ495M9 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
USH1GQ495M9 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
USH1GQ495M9 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USH1GQ495M9 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
USH1GQ495M9 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
USH1GQ495M9 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.77■□□□□ 0.44
USH1GQ495M9 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.77■□□□□ 0.44
USH1GQ495M9 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
USH1GQ495M9 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
USH1GQ495M9 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.77■□□□□ 0.44
USH1GQ495M9 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.77■□□□□ 0.44
USH1GQ495M9 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
USH1GQ495M9 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
USH1GQ495M9 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms