Protein–RNA interactions for Protein: Q15032

R3HDM1, R3H domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,099 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1Q15032 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.11■□□□□ 0.65
R3HDM1Q15032 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3HDM1Q15032 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
R3HDM1Q15032 RPSAP15-201ENST00000448168 861 ntBASIC19.11■□□□□ 0.65
R3HDM1Q15032 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC19.11■□□□□ 0.65
R3HDM1Q15032 CISD2-202ENST00000503643 808 ntTSL 2 BASIC19.11■□□□□ 0.65
R3HDM1Q15032 CDC23-208ENST00000505120 455 ntTSL 3 BASIC19.11■□□□□ 0.65
R3HDM1Q15032 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC19.11■□□□□ 0.65
R3HDM1Q15032 NEU3-207ENST00000534628 746 ntTSL 2 BASIC19.11■□□□□ 0.65
R3HDM1Q15032 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
R3HDM1Q15032 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC19.11■□□□□ 0.65
R3HDM1Q15032 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC19.11■□□□□ 0.65
R3HDM1Q15032 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC19.11■□□□□ 0.65
R3HDM1Q15032 CMC2-224ENST00000630396 481 ntTSL 5 BASIC19.11■□□□□ 0.65
R3HDM1Q15032 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
R3HDM1Q15032 Z98259.2-201ENST00000641583 609 ntBASIC19.11■□□□□ 0.65
R3HDM1Q15032 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3HDM1Q15032 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
R3HDM1Q15032 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
R3HDM1Q15032 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.11■□□□□ 0.65
R3HDM1Q15032 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3HDM1Q15032 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3HDM1Q15032 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
R3HDM1Q15032 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC19.11■□□□□ 0.65
R3HDM1Q15032 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
R3HDM1Q15032 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HDM1Q15032 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HDM1Q15032 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
R3HDM1Q15032 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HDM1Q15032 AC005332.8-201ENST00000622750 2735 ntBASIC19.1■□□□□ 0.65
R3HDM1Q15032 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HDM1Q15032 AC008764.6-201ENST00000595909 2069 ntBASIC19.1■□□□□ 0.65
R3HDM1Q15032 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
R3HDM1Q15032 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC19.1■□□□□ 0.65
R3HDM1Q15032 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
R3HDM1Q15032 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
R3HDM1Q15032 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC19.1■□□□□ 0.65
R3HDM1Q15032 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HDM1Q15032 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.1■□□□□ 0.65
R3HDM1Q15032 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HDM1Q15032 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
R3HDM1Q15032 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC19.1■□□□□ 0.65
R3HDM1Q15032 RBM38-204ENST00000371219 760 ntTSL 2 BASIC19.1■□□□□ 0.65
R3HDM1Q15032 HLA-DMA-203ENST00000395305 777 ntBASIC19.1■□□□□ 0.65
R3HDM1Q15032 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
R3HDM1Q15032 BANF1P3-201ENST00000412556 261 ntBASIC19.1■□□□□ 0.65
R3HDM1Q15032 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC19.1■□□□□ 0.65
R3HDM1Q15032 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC19.1■□□□□ 0.65
R3HDM1Q15032 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC19.1■□□□□ 0.65
R3HDM1Q15032 AL135901.1-201ENST00000451812 333 ntBASIC19.1■□□□□ 0.65
R3HDM1Q15032 RN7SL494P-201ENST00000461517 304 ntBASIC19.1■□□□□ 0.65
R3HDM1Q15032 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC19.1■□□□□ 0.65
R3HDM1Q15032 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC19.1■□□□□ 0.65
R3HDM1Q15032 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC19.1■□□□□ 0.65
R3HDM1Q15032 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC19.1■□□□□ 0.65
R3HDM1Q15032 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.1■□□□□ 0.65
R3HDM1Q15032 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
R3HDM1Q15032 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
R3HDM1Q15032 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HDM1Q15032 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
R3HDM1Q15032 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HDM1Q15032 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.1■□□□□ 0.65
R3HDM1Q15032 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HDM1Q15032 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HDM1Q15032 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC19.09■□□□□ 0.65
R3HDM1Q15032 AC134043.2-201ENST00000624206 2238 ntBASIC19.09■□□□□ 0.65
R3HDM1Q15032 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
R3HDM1Q15032 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HDM1Q15032 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC19.09■□□□□ 0.65
R3HDM1Q15032 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.09■□□□□ 0.65
R3HDM1Q15032 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
R3HDM1Q15032 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HDM1Q15032 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HDM1Q15032 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
R3HDM1Q15032 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HDM1Q15032 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HDM1Q15032 DPY19L2P5-201ENST00000456300 331 ntBASIC19.09■□□□□ 0.65
R3HDM1Q15032 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.09■□□□□ 0.65
R3HDM1Q15032 GDNF-207ENST00000515058 764 ntTSL 5 BASIC19.09■□□□□ 0.65
R3HDM1Q15032 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC19.09■□□□□ 0.65
R3HDM1Q15032 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC19.09■□□□□ 0.65
R3HDM1Q15032 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC19.09■□□□□ 0.65
R3HDM1Q15032 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HDM1Q15032 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HDM1Q15032 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HDM1Q15032 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HDM1Q15032 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
R3HDM1Q15032 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
R3HDM1Q15032 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HDM1Q15032 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC19.09■□□□□ 0.65
R3HDM1Q15032 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HDM1Q15032 INE2-201ENST00000630399 1874 ntBASIC19.09■□□□□ 0.65
R3HDM1Q15032 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.09■□□□□ 0.65
R3HDM1Q15032 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
R3HDM1Q15032 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC19.08■□□□□ 0.65
R3HDM1Q15032 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
R3HDM1Q15032 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC19.08■□□□□ 0.65
R3HDM1Q15032 AC060834.1-201ENST00000443027 2032 ntBASIC19.08■□□□□ 0.65
R3HDM1Q15032 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
R3HDM1Q15032 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms