Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNB3Q05901 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNB3Q05901 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNB3Q05901 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNB3Q05901 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNB3Q05901 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNB3Q05901 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.81□□□□□ -0.04
CHRNB3Q05901 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNB3Q05901 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB3Q05901 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB3Q05901 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB3Q05901 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRNB3Q05901 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRNB3Q05901 CICP4-201ENST00000447359 2812 ntBASIC14.8□□□□□ -0.04
CHRNB3Q05901 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB3Q05901 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CHRNB3Q05901 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB3Q05901 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB3Q05901 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CHRNB3Q05901 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB3Q05901 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.8□□□□□ -0.04
CHRNB3Q05901 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB3Q05901 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.8□□□□□ -0.04
CHRNB3Q05901 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CHRNB3Q05901 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRNB3Q05901 UPF3AP3-201ENST00000420996 769 ntBASIC14.8□□□□□ -0.04
CHRNB3Q05901 AC004832.2-201ENST00000426397 482 ntBASIC14.8□□□□□ -0.04
CHRNB3Q05901 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB3Q05901 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRNB3Q05901 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.8□□□□□ -0.04
CHRNB3Q05901 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.8□□□□□ -0.04
CHRNB3Q05901 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CHRNB3Q05901 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.8□□□□□ -0.04
CHRNB3Q05901 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRNB3Q05901 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB3Q05901 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRNB3Q05901 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRNB3Q05901 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB3Q05901 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB3Q05901 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB3Q05901 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB3Q05901 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
CHRNB3Q05901 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB3Q05901 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.8□□□□□ -0.04
CHRNB3Q05901 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRNB3Q05901 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB3Q05901 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB3Q05901 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB3Q05901 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB3Q05901 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
CHRNB3Q05901 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB3Q05901 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB3Q05901 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB3Q05901 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB3Q05901 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB3Q05901 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRNB3Q05901 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB3Q05901 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB3Q05901 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB3Q05901 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB3Q05901 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB3Q05901 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB3Q05901 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB3Q05901 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB3Q05901 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 VN2R19P-201ENST00000442399 1052 ntBASIC14.79□□□□□ -0.04
CHRNB3Q05901 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB3Q05901 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB3Q05901 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 AC024267.1-201ENST00000582320 895 ntBASIC14.79□□□□□ -0.04
CHRNB3Q05901 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB3Q05901 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB3Q05901 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB3Q05901 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms