Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IRX3P78415 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
IRX3P78415 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
IRX3P78415 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IRX3P78415 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.14■□□□□ 0.49
IRX3P78415 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
IRX3P78415 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IRX3P78415 AC092171.3-201ENST00000610122 2651 ntBASIC18.14■□□□□ 0.49
IRX3P78415 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IRX3P78415 ACKR1-201ENST00000368121 1240 ntBASIC18.14■□□□□ 0.49
IRX3P78415 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.14■□□□□ 0.49
IRX3P78415 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
IRX3P78415 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.14■□□□□ 0.49
IRX3P78415 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
IRX3P78415 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC18.14■□□□□ 0.49
IRX3P78415 RPL13AP20-201ENST00000459725 609 ntBASIC18.14■□□□□ 0.49
IRX3P78415 AP001582.1-201ENST00000525856 295 ntBASIC18.14■□□□□ 0.49
IRX3P78415 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.14■□□□□ 0.49
IRX3P78415 AC107373.2-201ENST00000607735 490 ntBASIC18.14■□□□□ 0.49
IRX3P78415 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.14■□□□□ 0.49
IRX3P78415 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IRX3P78415 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
IRX3P78415 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
IRX3P78415 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC18.14■□□□□ 0.49
IRX3P78415 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC18.14■□□□□ 0.49
IRX3P78415 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
IRX3P78415 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
IRX3P78415 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
IRX3P78415 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IRX3P78415 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.14■□□□□ 0.49
IRX3P78415 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
IRX3P78415 DRD5P1-201ENST00000456605 1438 ntBASIC18.14■□□□□ 0.49
IRX3P78415 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.14■□□□□ 0.49
IRX3P78415 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IRX3P78415 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
IRX3P78415 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IRX3P78415 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IRX3P78415 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.13■□□□□ 0.49
IRX3P78415 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IRX3P78415 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
IRX3P78415 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
IRX3P78415 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.13■□□□□ 0.49
IRX3P78415 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
IRX3P78415 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IRX3P78415 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.13■□□□□ 0.49
IRX3P78415 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.13■□□□□ 0.49
IRX3P78415 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.13■□□□□ 0.49
IRX3P78415 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC18.13■□□□□ 0.49
IRX3P78415 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IRX3P78415 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC18.13■□□□□ 0.49
IRX3P78415 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
IRX3P78415 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IRX3P78415 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IRX3P78415 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IRX3P78415 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
IRX3P78415 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
IRX3P78415 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IRX3P78415 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC18.13■□□□□ 0.49
IRX3P78415 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IRX3P78415 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
IRX3P78415 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IRX3P78415 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
IRX3P78415 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
IRX3P78415 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.13■□□□□ 0.49
IRX3P78415 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.13■□□□□ 0.49
IRX3P78415 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IRX3P78415 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
IRX3P78415 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.13■□□□□ 0.49
IRX3P78415 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IRX3P78415 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.12■□□□□ 0.49
IRX3P78415 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.12■□□□□ 0.49
IRX3P78415 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
IRX3P78415 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
IRX3P78415 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC18.12■□□□□ 0.49
IRX3P78415 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IRX3P78415 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.12■□□□□ 0.49
IRX3P78415 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.12■□□□□ 0.49
IRX3P78415 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
IRX3P78415 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
IRX3P78415 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IRX3P78415 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
IRX3P78415 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
IRX3P78415 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.12■□□□□ 0.49
IRX3P78415 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
IRX3P78415 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
IRX3P78415 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC18.12■□□□□ 0.49
IRX3P78415 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
IRX3P78415 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
IRX3P78415 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
IRX3P78415 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.12■□□□□ 0.49
IRX3P78415 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
IRX3P78415 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.12■□□□□ 0.49
IRX3P78415 GNRHR2-203ENST00000581100 1187 ntBASIC18.12■□□□□ 0.49
IRX3P78415 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.12■□□□□ 0.49
IRX3P78415 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
IRX3P78415 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.12■□□□□ 0.49
IRX3P78415 AC091271.1-201ENST00000611877 1162 ntBASIC18.12■□□□□ 0.49
IRX3P78415 AC008687.7-202ENST00000637404 953 ntBASIC18.12■□□□□ 0.49
IRX3P78415 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IRX3P78415 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms