Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
VBP1P61758 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14□□□□□ -0.17
VBP1P61758 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
VBP1P61758 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14□□□□□ -0.17
VBP1P61758 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14□□□□□ -0.17
VBP1P61758 TERF1P1-201ENST00000311003 1181 ntBASIC14□□□□□ -0.17
VBP1P61758 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14□□□□□ -0.17
VBP1P61758 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
VBP1P61758 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
VBP1P61758 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14□□□□□ -0.17
VBP1P61758 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14□□□□□ -0.17
VBP1P61758 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14□□□□□ -0.17
VBP1P61758 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14□□□□□ -0.17
VBP1P61758 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14□□□□□ -0.17
VBP1P61758 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
VBP1P61758 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14□□□□□ -0.17
VBP1P61758 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14□□□□□ -0.17
VBP1P61758 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14□□□□□ -0.17
VBP1P61758 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
VBP1P61758 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14□□□□□ -0.17
VBP1P61758 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
VBP1P61758 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14□□□□□ -0.17
VBP1P61758 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
VBP1P61758 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14□□□□□ -0.17
VBP1P61758 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VBP1P61758 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14□□□□□ -0.17
VBP1P61758 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VBP1P61758 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
VBP1P61758 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14□□□□□ -0.17
VBP1P61758 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14□□□□□ -0.17
VBP1P61758 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
VBP1P61758 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
VBP1P61758 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC14□□□□□ -0.17
VBP1P61758 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VBP1P61758 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14□□□□□ -0.17
VBP1P61758 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
VBP1P61758 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VBP1P61758 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VBP1P61758 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
VBP1P61758 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VBP1P61758 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VBP1P61758 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.99□□□□□ -0.17
VBP1P61758 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
VBP1P61758 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VBP1P61758 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VBP1P61758 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VBP1P61758 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VBP1P61758 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VBP1P61758 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VBP1P61758 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
VBP1P61758 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.99□□□□□ -0.17
VBP1P61758 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VBP1P61758 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
VBP1P61758 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VBP1P61758 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
VBP1P61758 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VBP1P61758 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VBP1P61758 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
VBP1P61758 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VBP1P61758 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
VBP1P61758 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.99□□□□□ -0.17
VBP1P61758 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.99□□□□□ -0.17
VBP1P61758 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
VBP1P61758 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
VBP1P61758 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC13.99□□□□□ -0.17
VBP1P61758 AK4P3-201ENST00000418260 669 ntBASIC13.99□□□□□ -0.17
VBP1P61758 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.99□□□□□ -0.17
VBP1P61758 IGHV3-47-201ENST00000425060 335 ntBASIC13.99□□□□□ -0.17
VBP1P61758 GPX1P2-201ENST00000429271 606 ntBASIC13.99□□□□□ -0.17
VBP1P61758 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.99□□□□□ -0.17
VBP1P61758 AL671277.2-201ENST00000458060 996 ntBASIC13.99□□□□□ -0.17
VBP1P61758 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
VBP1P61758 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.99□□□□□ -0.17
VBP1P61758 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.99□□□□□ -0.17
VBP1P61758 NKAPP1-205ENST00000585790 367 ntBASIC13.99□□□□□ -0.17
VBP1P61758 AC004706.3-202ENST00000621574 984 ntBASIC13.99□□□□□ -0.17
VBP1P61758 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.99□□□□□ -0.17
VBP1P61758 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VBP1P61758 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VBP1P61758 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VBP1P61758 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VBP1P61758 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.99□□□□□ -0.17
VBP1P61758 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.99□□□□□ -0.17
VBP1P61758 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
VBP1P61758 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.99□□□□□ -0.17
VBP1P61758 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
VBP1P61758 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VBP1P61758 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.99□□□□□ -0.17
VBP1P61758 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VBP1P61758 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.99□□□□□ -0.17
VBP1P61758 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.99□□□□□ -0.17
VBP1P61758 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VBP1P61758 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VBP1P61758 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.98□□□□□ -0.17
VBP1P61758 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
VBP1P61758 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VBP1P61758 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.98□□□□□ -0.17
VBP1P61758 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.98□□□□□ -0.17
VBP1P61758 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.98□□□□□ -0.17
VBP1P61758 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms