Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS3P61009 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS3P61009 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS3P61009 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS3P61009 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
SPCS3P61009 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SPCS3P61009 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SPCS3P61009 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
SPCS3P61009 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.76□□□□□ -0.37
SPCS3P61009 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS3P61009 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS3P61009 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS3P61009 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.76□□□□□ -0.37
SPCS3P61009 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
SPCS3P61009 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS3P61009 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS3P61009 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS3P61009 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.75□□□□□ -0.37
SPCS3P61009 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
SPCS3P61009 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SPCS3P61009 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS3P61009 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
SPCS3P61009 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS3P61009 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS3P61009 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS3P61009 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
SPCS3P61009 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS3P61009 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS3P61009 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS3P61009 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS3P61009 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SPCS3P61009 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS3P61009 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS3P61009 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS3P61009 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS3P61009 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS3P61009 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.75□□□□□ -0.37
SPCS3P61009 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS3P61009 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS3P61009 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.75□□□□□ -0.37
SPCS3P61009 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS3P61009 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
SPCS3P61009 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
SPCS3P61009 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.75□□□□□ -0.37
SPCS3P61009 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SPCS3P61009 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC12.75□□□□□ -0.37
SPCS3P61009 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.75□□□□□ -0.37
SPCS3P61009 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.75□□□□□ -0.37
SPCS3P61009 AC079781.3-201ENST00000449110 356 ntBASIC12.75□□□□□ -0.37
SPCS3P61009 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC12.75□□□□□ -0.37
SPCS3P61009 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.75□□□□□ -0.37
SPCS3P61009 AC091951.1-201ENST00000512854 2465 ntBASIC12.75□□□□□ -0.37
SPCS3P61009 IGHV3-22-201ENST00000520721 359 ntBASIC12.75□□□□□ -0.37
SPCS3P61009 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC12.75□□□□□ -0.37
SPCS3P61009 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SPCS3P61009 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.75□□□□□ -0.37
SPCS3P61009 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.75□□□□□ -0.37
SPCS3P61009 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SPCS3P61009 KRT19P2-202ENST00000557173 1012 ntBASIC12.75□□□□□ -0.37
SPCS3P61009 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS3P61009 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS3P61009 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SPCS3P61009 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS3P61009 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.75□□□□□ -0.37
SPCS3P61009 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.75□□□□□ -0.37
SPCS3P61009 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.75□□□□□ -0.37
SPCS3P61009 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.75□□□□□ -0.37
SPCS3P61009 AC027601.5-201ENST00000624065 2482 ntBASIC12.75□□□□□ -0.37
SPCS3P61009 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.75□□□□□ -0.37
SPCS3P61009 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.75□□□□□ -0.37
SPCS3P61009 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS3P61009 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS3P61009 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS3P61009 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.75□□□□□ -0.37
SPCS3P61009 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS3P61009 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS3P61009 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SPCS3P61009 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS3P61009 AC027612.1-201ENST00000445234 2395 ntBASIC12.74□□□□□ -0.37
SPCS3P61009 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.74□□□□□ -0.37
SPCS3P61009 AC126335.2-201ENST00000623362 4637 ntBASIC12.74□□□□□ -0.37
SPCS3P61009 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.74□□□□□ -0.37
SPCS3P61009 AC013726.1-201ENST00000563747 2285 ntBASIC12.74□□□□□ -0.37
SPCS3P61009 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS3P61009 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS3P61009 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS3P61009 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.74□□□□□ -0.37
SPCS3P61009 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS3P61009 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS3P61009 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SPCS3P61009 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS3P61009 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS3P61009 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.74□□□□□ -0.37
SPCS3P61009 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS3P61009 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.74□□□□□ -0.37
SPCS3P61009 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SPCS3P61009 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS3P61009 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
SPCS3P61009 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.74□□□□□ -0.37
SPCS3P61009 AC148477.4-201ENST00000613430 1793 ntBASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms