Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.94□□□□□ -0.18
CLRN1P58418 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.94□□□□□ -0.18
CLRN1P58418 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CLRN1P58418 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLRN1P58418 SDHAP3-202ENST00000515467 728 ntBASIC13.94□□□□□ -0.18
CLRN1P58418 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.94□□□□□ -0.18
CLRN1P58418 AC010336.2-201ENST00000564226 506 ntBASIC13.94□□□□□ -0.18
CLRN1P58418 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.94□□□□□ -0.18
CLRN1P58418 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLRN1P58418 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.94□□□□□ -0.18
CLRN1P58418 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.94□□□□□ -0.18
CLRN1P58418 AC074044.1-201ENST00000609673 707 ntBASIC13.94□□□□□ -0.18
CLRN1P58418 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CLRN1P58418 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLRN1P58418 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLRN1P58418 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLRN1P58418 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLRN1P58418 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLRN1P58418 AC112693.3-201ENST00000624819 1983 ntBASIC13.94□□□□□ -0.18
CLRN1P58418 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLRN1P58418 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.94□□□□□ -0.18
CLRN1P58418 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLRN1P58418 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLRN1P58418 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
CLRN1P58418 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
CLRN1P58418 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLRN1P58418 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.94□□□□□ -0.18
CLRN1P58418 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLRN1P58418 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.94□□□□□ -0.18
CLRN1P58418 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLRN1P58418 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.93□□□□□ -0.18
CLRN1P58418 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLRN1P58418 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CLRN1P58418 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CLRN1P58418 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLRN1P58418 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLRN1P58418 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.93□□□□□ -0.18
CLRN1P58418 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLRN1P58418 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLRN1P58418 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.93□□□□□ -0.18
CLRN1P58418 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLRN1P58418 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLRN1P58418 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.93□□□□□ -0.18
CLRN1P58418 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.93□□□□□ -0.18
CLRN1P58418 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLRN1P58418 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CLRN1P58418 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CLRN1P58418 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLRN1P58418 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.93□□□□□ -0.18
CLRN1P58418 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.93□□□□□ -0.18
CLRN1P58418 AC097493.3-201ENST00000509725 367 ntBASIC13.93□□□□□ -0.18
CLRN1P58418 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.93□□□□□ -0.18
CLRN1P58418 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.93□□□□□ -0.18
CLRN1P58418 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.93□□□□□ -0.18
CLRN1P58418 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLRN1P58418 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.93□□□□□ -0.18
CLRN1P58418 AL109936.8-201ENST00000641772 604 ntBASIC13.93□□□□□ -0.18
CLRN1P58418 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLRN1P58418 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.93□□□□□ -0.18
CLRN1P58418 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.93□□□□□ -0.18
CLRN1P58418 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLRN1P58418 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLRN1P58418 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLRN1P58418 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLRN1P58418 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.93□□□□□ -0.18
CLRN1P58418 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.93□□□□□ -0.18
CLRN1P58418 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.93□□□□□ -0.18
CLRN1P58418 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.93□□□□□ -0.18
CLRN1P58418 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLRN1P58418 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLRN1P58418 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.93□□□□□ -0.18
CLRN1P58418 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLRN1P58418 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLRN1P58418 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.93□□□□□ -0.18
CLRN1P58418 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.93□□□□□ -0.18
CLRN1P58418 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.93□□□□□ -0.18
CLRN1P58418 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLRN1P58418 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.92□□□□□ -0.18
CLRN1P58418 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CLRN1P58418 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.92□□□□□ -0.18
CLRN1P58418 AC087499.5-201ENST00000452760 1342 ntBASIC13.92□□□□□ -0.18
CLRN1P58418 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLRN1P58418 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLRN1P58418 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.92□□□□□ -0.18
CLRN1P58418 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.92□□□□□ -0.18
CLRN1P58418 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CLRN1P58418 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.92□□□□□ -0.18
CLRN1P58418 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.92□□□□□ -0.18
CLRN1P58418 AC006486.2-201ENST00000624246 2199 ntBASIC13.92□□□□□ -0.18
CLRN1P58418 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.92□□□□□ -0.18
CLRN1P58418 AC100757.3-201ENST00000622361 1406 ntBASIC13.92□□□□□ -0.18
CLRN1P58418 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CLRN1P58418 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLRN1P58418 AC148477.4-201ENST00000613430 1793 ntBASIC13.92□□□□□ -0.18
CLRN1P58418 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
CLRN1P58418 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLRN1P58418 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CLRN1P58418 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
CLRN1P58418 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLRN1P58418 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms