Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.91□□□□□ -0.02
VSX2P58304 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.91□□□□□ -0.02
VSX2P58304 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.91□□□□□ -0.02
VSX2P58304 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VSX2P58304 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
VSX2P58304 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.91□□□□□ -0.02
VSX2P58304 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
VSX2P58304 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VSX2P58304 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VSX2P58304 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
VSX2P58304 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
VSX2P58304 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VSX2P58304 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
VSX2P58304 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
VSX2P58304 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VSX2P58304 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VSX2P58304 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VSX2P58304 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.91□□□□□ -0.02
VSX2P58304 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
VSX2P58304 AC098614.1-201ENST00000368528 745 ntBASIC14.91□□□□□ -0.02
VSX2P58304 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.91□□□□□ -0.02
VSX2P58304 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VSX2P58304 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.91□□□□□ -0.02
VSX2P58304 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.91□□□□□ -0.02
VSX2P58304 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.91□□□□□ -0.02
VSX2P58304 AC005034.1-201ENST00000426657 489 ntBASIC14.91□□□□□ -0.02
VSX2P58304 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
VSX2P58304 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.91□□□□□ -0.02
VSX2P58304 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VSX2P58304 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VSX2P58304 RN7SL752P-201ENST00000463779 287 ntBASIC14.91□□□□□ -0.02
VSX2P58304 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.91□□□□□ -0.02
VSX2P58304 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.91□□□□□ -0.02
VSX2P58304 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
VSX2P58304 TMEM261P1-201ENST00000604899 340 ntBASIC14.91□□□□□ -0.02
VSX2P58304 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.91□□□□□ -0.02
VSX2P58304 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VSX2P58304 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VSX2P58304 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VSX2P58304 AC063926.3-201ENST00000624734 5658 ntBASIC14.91□□□□□ -0.02
VSX2P58304 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.91□□□□□ -0.02
VSX2P58304 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VSX2P58304 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VSX2P58304 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VSX2P58304 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VSX2P58304 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
VSX2P58304 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VSX2P58304 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VSX2P58304 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VSX2P58304 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.91□□□□□ -0.02
VSX2P58304 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VSX2P58304 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
VSX2P58304 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VSX2P58304 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.9□□□□□ -0.02
VSX2P58304 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VSX2P58304 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.9□□□□□ -0.02
VSX2P58304 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
VSX2P58304 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VSX2P58304 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
VSX2P58304 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
VSX2P58304 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.9□□□□□ -0.02
VSX2P58304 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.9□□□□□ -0.02
VSX2P58304 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.9□□□□□ -0.02
VSX2P58304 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VSX2P58304 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
VSX2P58304 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VSX2P58304 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
VSX2P58304 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.9□□□□□ -0.02
VSX2P58304 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.9□□□□□ -0.02
VSX2P58304 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VSX2P58304 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
VSX2P58304 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VSX2P58304 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VSX2P58304 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VSX2P58304 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VSX2P58304 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
VSX2P58304 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
VSX2P58304 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VSX2P58304 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VSX2P58304 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.9□□□□□ -0.02
VSX2P58304 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.9□□□□□ -0.02
VSX2P58304 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.9□□□□□ -0.02
VSX2P58304 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.9□□□□□ -0.02
VSX2P58304 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.9□□□□□ -0.02
VSX2P58304 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.9□□□□□ -0.02
VSX2P58304 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
VSX2P58304 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.9□□□□□ -0.02
VSX2P58304 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.9□□□□□ -0.02
VSX2P58304 AL049840.4-201ENST00000602422 811 ntBASIC14.9□□□□□ -0.02
VSX2P58304 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.9□□□□□ -0.02
VSX2P58304 WFDC1-204ENST00000613603 549 ntBASIC14.9□□□□□ -0.02
VSX2P58304 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.9□□□□□ -0.02
VSX2P58304 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VSX2P58304 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
VSX2P58304 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VSX2P58304 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
VSX2P58304 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VSX2P58304 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
VSX2P58304 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
VSX2P58304 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms