Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CLDN20P56880 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDN20P56880 AC104794.3-201ENST00000566840 1248 ntBASIC14.31□□□□□ -0.12
CLDN20P56880 AL450472.2-201ENST00000603663 1156 ntBASIC14.31□□□□□ -0.12
CLDN20P56880 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.31□□□□□ -0.12
CLDN20P56880 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.31□□□□□ -0.12
CLDN20P56880 AC009118.2-201ENST00000613275 655 ntBASIC14.31□□□□□ -0.12
CLDN20P56880 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.31□□□□□ -0.12
CLDN20P56880 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.31□□□□□ -0.12
CLDN20P56880 AC004461.2-201ENST00000629517 803 ntBASIC14.31□□□□□ -0.12
CLDN20P56880 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN20P56880 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN20P56880 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CLDN20P56880 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN20P56880 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN20P56880 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN20P56880 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN20P56880 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN20P56880 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN20P56880 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN20P56880 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDN20P56880 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN20P56880 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CLDN20P56880 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CLDN20P56880 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN20P56880 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CLDN20P56880 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN20P56880 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CLDN20P56880 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN20P56880 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN20P56880 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN20P56880 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN20P56880 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN20P56880 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDN20P56880 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN20P56880 AC139749.1-202ENST00000617529 3139 ntBASIC14.3□□□□□ -0.12
CLDN20P56880 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN20P56880 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN20P56880 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN20P56880 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN20P56880 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN20P56880 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
CLDN20P56880 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN20P56880 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN20P56880 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN20P56880 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN20P56880 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CLDN20P56880 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN20P56880 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CLDN20P56880 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN20P56880 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.3□□□□□ -0.12
CLDN20P56880 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN20P56880 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN20P56880 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.3□□□□□ -0.12
CLDN20P56880 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN20P56880 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN20P56880 AC114501.2-201ENST00000439631 535 ntBASIC14.3□□□□□ -0.12
CLDN20P56880 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.3□□□□□ -0.12
CLDN20P56880 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN20P56880 TERF1P3-201ENST00000505638 1227 ntBASIC14.3□□□□□ -0.12
CLDN20P56880 AC138761.1-201ENST00000584393 385 ntBASIC14.3□□□□□ -0.12
CLDN20P56880 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN20P56880 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.3□□□□□ -0.12
CLDN20P56880 LINC02084-201ENST00000606069 1096 ntBASIC14.3□□□□□ -0.12
CLDN20P56880 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN20P56880 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CLDN20P56880 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN20P56880 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN20P56880 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN20P56880 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.3□□□□□ -0.12
CLDN20P56880 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CLDN20P56880 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN20P56880 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN20P56880 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN20P56880 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CLDN20P56880 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN20P56880 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN20P56880 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN20P56880 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN20P56880 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CLDN20P56880 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN20P56880 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.3□□□□□ -0.12
CLDN20P56880 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN20P56880 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN20P56880 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN20P56880 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.29□□□□□ -0.12
CLDN20P56880 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CLDN20P56880 AC020658.6-201ENST00000623564 1870 ntBASIC14.29□□□□□ -0.12
CLDN20P56880 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CLDN20P56880 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CLDN20P56880 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms