Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH6P55285 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH6P55285 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
CDH6P55285 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
CDH6P55285 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH6P55285 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH6P55285 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH6P55285 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH6P55285 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH6P55285 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH6P55285 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CDH6P55285 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH6P55285 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH6P55285 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.2■□□□□ 0.18
CDH6P55285 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH6P55285 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH6P55285 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CDH6P55285 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH6P55285 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH6P55285 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH6P55285 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH6P55285 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.2■□□□□ 0.18
CDH6P55285 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.2■□□□□ 0.18
CDH6P55285 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.2■□□□□ 0.18
CDH6P55285 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.2■□□□□ 0.18
CDH6P55285 AC241585.1-201ENST00000433527 519 ntBASIC16.2■□□□□ 0.18
CDH6P55285 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CDH6P55285 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH6P55285 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.2■□□□□ 0.18
CDH6P55285 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH6P55285 RFPL4AP1-201ENST00000530883 850 ntBASIC16.2■□□□□ 0.18
CDH6P55285 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.2■□□□□ 0.18
CDH6P55285 AC093512.1-201ENST00000617969 520 ntBASIC16.2■□□□□ 0.18
CDH6P55285 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CDH6P55285 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CDH6P55285 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH6P55285 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CDH6P55285 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.2■□□□□ 0.18
CDH6P55285 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CDH6P55285 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH6P55285 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.2■□□□□ 0.18
CDH6P55285 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
CDH6P55285 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH6P55285 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH6P55285 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH6P55285 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH6P55285 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH6P55285 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH6P55285 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH6P55285 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CDH6P55285 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH6P55285 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH6P55285 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH6P55285 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH6P55285 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH6P55285 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH6P55285 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH6P55285 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CDH6P55285 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH6P55285 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH6P55285 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH6P55285 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH6P55285 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH6P55285 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH6P55285 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH6P55285 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
CDH6P55285 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH6P55285 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH6P55285 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH6P55285 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.19■□□□□ 0.18
CDH6P55285 AL133267.1-201ENST00000398220 340 ntBASIC16.19■□□□□ 0.18
CDH6P55285 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
CDH6P55285 AC055876.3-201ENST00000431496 288 ntBASIC16.19■□□□□ 0.18
CDH6P55285 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.19■□□□□ 0.18
CDH6P55285 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH6P55285 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.19■□□□□ 0.18
CDH6P55285 AC138649.4-201ENST00000612222 287 ntBASIC16.19■□□□□ 0.18
CDH6P55285 AL390754.1-201ENST00000619088 582 ntBASIC16.19■□□□□ 0.18
CDH6P55285 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.19■□□□□ 0.18
CDH6P55285 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH6P55285 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.19■□□□□ 0.18
CDH6P55285 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH6P55285 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH6P55285 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH6P55285 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH6P55285 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH6P55285 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH6P55285 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH6P55285 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH6P55285 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH6P55285 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.19■□□□□ 0.18
CDH6P55285 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH6P55285 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH6P55285 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH6P55285 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH6P55285 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH6P55285 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH6P55285 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH6P55285 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH6P55285 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms