Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.36■□□□□ 0.05
CDKN2DP55273 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDKN2DP55273 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.36■□□□□ 0.05
CDKN2DP55273 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CDKN2DP55273 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CDKN2DP55273 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CDKN2DP55273 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.36■□□□□ 0.05
CDKN2DP55273 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKN2DP55273 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKN2DP55273 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKN2DP55273 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CDKN2DP55273 AC013726.1-201ENST00000563747 2285 ntBASIC15.36■□□□□ 0.05
CDKN2DP55273 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKN2DP55273 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKN2DP55273 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKN2DP55273 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CDKN2DP55273 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.35■□□□□ 0.05
CDKN2DP55273 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDKN2DP55273 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKN2DP55273 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKN2DP55273 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDKN2DP55273 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDKN2DP55273 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKN2DP55273 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.35■□□□□ 0.05
CDKN2DP55273 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKN2DP55273 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDKN2DP55273 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKN2DP55273 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKN2DP55273 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKN2DP55273 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.35■□□□□ 0.05
CDKN2DP55273 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.35■□□□□ 0.05
CDKN2DP55273 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.35■□□□□ 0.05
CDKN2DP55273 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.35■□□□□ 0.05
CDKN2DP55273 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CDKN2DP55273 KRT18P43-201ENST00000469825 1281 ntBASIC15.35■□□□□ 0.05
CDKN2DP55273 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.35■□□□□ 0.05
CDKN2DP55273 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDKN2DP55273 ZNF890P-202ENST00000530367 1156 ntBASIC15.35■□□□□ 0.05
CDKN2DP55273 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.35■□□□□ 0.05
CDKN2DP55273 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CDKN2DP55273 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.35■□□□□ 0.05
CDKN2DP55273 AC004461.2-201ENST00000629517 803 ntBASIC15.35■□□□□ 0.05
CDKN2DP55273 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.35■□□□□ 0.05
CDKN2DP55273 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
CDKN2DP55273 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKN2DP55273 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CDKN2DP55273 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKN2DP55273 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKN2DP55273 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.35■□□□□ 0.05
CDKN2DP55273 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.35■□□□□ 0.05
CDKN2DP55273 LINC01101-201ENST00000622953 1884 ntBASIC15.35■□□□□ 0.05
CDKN2DP55273 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKN2DP55273 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKN2DP55273 AC099063.4-201ENST00000641099 1602 ntBASIC15.35■□□□□ 0.05
CDKN2DP55273 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKN2DP55273 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.35■□□□□ 0.05
CDKN2DP55273 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKN2DP55273 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDKN2DP55273 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CDKN2DP55273 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.35■□□□□ 0.05
CDKN2DP55273 WASH3P-207ENST00000560956 1394 ntBASIC15.35■□□□□ 0.05
CDKN2DP55273 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDKN2DP55273 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKN2DP55273 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDKN2DP55273 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKN2DP55273 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.35■□□□□ 0.05
CDKN2DP55273 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDKN2DP55273 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDKN2DP55273 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.34■□□□□ 0.05
CDKN2DP55273 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDKN2DP55273 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDKN2DP55273 AC138969.3-201ENST00000546612 1459 ntBASIC15.34■□□□□ 0.05
CDKN2DP55273 AC138932.2-201ENST00000548268 1459 ntBASIC15.34■□□□□ 0.05
CDKN2DP55273 AC126755.4-201ENST00000549796 1459 ntBASIC15.34■□□□□ 0.05
CDKN2DP55273 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.34■□□□□ 0.05
CDKN2DP55273 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.34■□□□□ 0.05
CDKN2DP55273 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDKN2DP55273 REXO1L2P-201ENST00000425429 2069 ntBASIC15.34■□□□□ 0.05
CDKN2DP55273 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDKN2DP55273 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CDKN2DP55273 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDKN2DP55273 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.34■□□□□ 0.05
CDKN2DP55273 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDKN2DP55273 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDKN2DP55273 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.34■□□□□ 0.05
CDKN2DP55273 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDKN2DP55273 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CDKN2DP55273 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CDKN2DP55273 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CDKN2DP55273 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.34■□□□□ 0.05
CDKN2DP55273 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDKN2DP55273 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDKN2DP55273 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.34■□□□□ 0.05
CDKN2DP55273 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.34■□□□□ 0.05
CDKN2DP55273 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.34■□□□□ 0.05
CDKN2DP55273 AC009407.1-201ENST00000568958 598 ntBASIC15.34■□□□□ 0.05
CDKN2DP55273 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.34■□□□□ 0.05
CDKN2DP55273 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.34■□□□□ 0.05
CDKN2DP55273 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDKN2DP55273 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms