Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATP1B3P54709 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATP1B3P54709 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
ATP1B3P54709 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
ATP1B3P54709 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATP1B3P54709 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.58□□□□□ -0.24
ATP1B3P54709 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATP1B3P54709 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ATP1B3P54709 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
ATP1B3P54709 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
ATP1B3P54709 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ATP1B3P54709 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ATP1B3P54709 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATP1B3P54709 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ATP1B3P54709 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ATP1B3P54709 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATP1B3P54709 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ATP1B3P54709 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.57□□□□□ -0.24
ATP1B3P54709 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.57□□□□□ -0.24
ATP1B3P54709 LINC00552-201ENST00000625151 2579 ntBASIC13.57□□□□□ -0.24
ATP1B3P54709 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.57□□□□□ -0.24
ATP1B3P54709 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
ATP1B3P54709 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ATP1B3P54709 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATP1B3P54709 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATP1B3P54709 AL022342.1-201ENST00000400363 863 ntBASIC13.57□□□□□ -0.24
ATP1B3P54709 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ATP1B3P54709 AL353705.2-201ENST00000428243 662 ntBASIC13.57□□□□□ -0.24
ATP1B3P54709 EEF1DP4-201ENST00000446006 880 ntBASIC13.57□□□□□ -0.24
ATP1B3P54709 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.57□□□□□ -0.24
ATP1B3P54709 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.57□□□□□ -0.24
ATP1B3P54709 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ATP1B3P54709 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
ATP1B3P54709 AC005829.1-201ENST00000570002 483 ntBASIC13.57□□□□□ -0.24
ATP1B3P54709 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
ATP1B3P54709 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATP1B3P54709 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATP1B3P54709 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ATP1B3P54709 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.57□□□□□ -0.24
ATP1B3P54709 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATP1B3P54709 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
ATP1B3P54709 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.57□□□□□ -0.24
ATP1B3P54709 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.57□□□□□ -0.24
ATP1B3P54709 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
ATP1B3P54709 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
ATP1B3P54709 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ATP1B3P54709 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATP1B3P54709 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATP1B3P54709 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATP1B3P54709 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATP1B3P54709 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ATP1B3P54709 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
ATP1B3P54709 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATP1B3P54709 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATP1B3P54709 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATP1B3P54709 ELL2P1-201ENST00000413990 1906 ntBASIC13.56□□□□□ -0.24
ATP1B3P54709 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATP1B3P54709 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATP1B3P54709 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.56□□□□□ -0.24
ATP1B3P54709 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATP1B3P54709 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ATP1B3P54709 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATP1B3P54709 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATP1B3P54709 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ATP1B3P54709 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATP1B3P54709 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATP1B3P54709 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.56□□□□□ -0.24
ATP1B3P54709 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
ATP1B3P54709 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATP1B3P54709 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATP1B3P54709 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.56□□□□□ -0.24
ATP1B3P54709 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.56□□□□□ -0.24
ATP1B3P54709 DNAJB3-201ENST00000446806 729 ntBASIC13.56□□□□□ -0.24
ATP1B3P54709 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.56□□□□□ -0.24
ATP1B3P54709 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
ATP1B3P54709 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.56□□□□□ -0.24
ATP1B3P54709 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.56□□□□□ -0.24
ATP1B3P54709 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.56□□□□□ -0.24
ATP1B3P54709 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
ATP1B3P54709 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
ATP1B3P54709 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATP1B3P54709 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATP1B3P54709 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATP1B3P54709 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATP1B3P54709 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.56□□□□□ -0.24
ATP1B3P54709 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATP1B3P54709 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATP1B3P54709 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATP1B3P54709 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATP1B3P54709 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATP1B3P54709 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.56□□□□□ -0.24
ATP1B3P54709 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATP1B3P54709 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATP1B3P54709 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATP1B3P54709 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.56□□□□□ -0.24
ATP1B3P54709 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.56□□□□□ -0.24
ATP1B3P54709 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ATP1B3P54709 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ATP1B3P54709 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
ATP1B3P54709 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms