Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SSR4P51571 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SSR4P51571 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.23□□□□□ -0.13
SSR4P51571 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
SSR4P51571 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SSR4P51571 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR4P51571 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SSR4P51571 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.22□□□□□ -0.13
SSR4P51571 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.22□□□□□ -0.13
SSR4P51571 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR4P51571 AC008894.3-201ENST00000624324 3103 ntBASIC14.22□□□□□ -0.13
SSR4P51571 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.22□□□□□ -0.13
SSR4P51571 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR4P51571 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR4P51571 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
SSR4P51571 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.22□□□□□ -0.13
SSR4P51571 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.22□□□□□ -0.13
SSR4P51571 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSR4P51571 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SSR4P51571 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR4P51571 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.22□□□□□ -0.13
SSR4P51571 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR4P51571 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SSR4P51571 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR4P51571 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SSR4P51571 AC005229.1-201ENST00000392885 409 ntBASIC14.22□□□□□ -0.13
SSR4P51571 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR4P51571 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.22□□□□□ -0.13
SSR4P51571 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.22□□□□□ -0.13
SSR4P51571 AC012441.1-201ENST00000446669 685 ntBASIC14.22□□□□□ -0.13
SSR4P51571 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.22□□□□□ -0.13
SSR4P51571 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.22□□□□□ -0.13
SSR4P51571 KRT18P25-201ENST00000508931 1278 ntBASIC14.22□□□□□ -0.13
SSR4P51571 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SSR4P51571 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSR4P51571 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.22□□□□□ -0.13
SSR4P51571 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.22□□□□□ -0.13
SSR4P51571 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.22□□□□□ -0.13
SSR4P51571 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
SSR4P51571 AL512343.1-201ENST00000605837 169 ntBASIC14.22□□□□□ -0.13
SSR4P51571 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.22□□□□□ -0.13
SSR4P51571 AL008721.1-201ENST00000609964 604 ntBASIC14.22□□□□□ -0.13
SSR4P51571 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR4P51571 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.22□□□□□ -0.13
SSR4P51571 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSR4P51571 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR4P51571 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR4P51571 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR4P51571 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR4P51571 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SSR4P51571 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR4P51571 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR4P51571 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR4P51571 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
SSR4P51571 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR4P51571 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR4P51571 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.22□□□□□ -0.13
SSR4P51571 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR4P51571 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR4P51571 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSR4P51571 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSR4P51571 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSR4P51571 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SSR4P51571 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSR4P51571 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SSR4P51571 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSR4P51571 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
SSR4P51571 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSR4P51571 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SSR4P51571 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSR4P51571 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
SSR4P51571 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSR4P51571 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SSR4P51571 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SSR4P51571 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSR4P51571 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSR4P51571 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.21□□□□□ -0.13
SSR4P51571 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.21□□□□□ -0.13
SSR4P51571 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
SSR4P51571 BCRP2-202ENST00000447763 634 ntBASIC14.21□□□□□ -0.13
SSR4P51571 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SSR4P51571 AC004066.1-201ENST00000502488 802 ntBASIC14.21□□□□□ -0.13
SSR4P51571 BCRP6-201ENST00000510112 632 ntBASIC14.21□□□□□ -0.13
SSR4P51571 BCRP7-201ENST00000511549 544 ntBASIC14.21□□□□□ -0.13
SSR4P51571 AP001889.1-201ENST00000525414 633 ntBASIC14.21□□□□□ -0.13
SSR4P51571 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSR4P51571 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.21□□□□□ -0.13
SSR4P51571 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.21□□□□□ -0.13
SSR4P51571 MIR6805-201ENST00000615055 62 ntBASIC14.21□□□□□ -0.13
SSR4P51571 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSR4P51571 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
SSR4P51571 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSR4P51571 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.21□□□□□ -0.13
SSR4P51571 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms