Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.21□□□□□ -0.14
CENPAP49450 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CENPAP49450 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
CENPAP49450 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CENPAP49450 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.21□□□□□ -0.14
CENPAP49450 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CENPAP49450 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CENPAP49450 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CENPAP49450 AC087386.2-201ENST00000623212 4637 ntBASIC14.21□□□□□ -0.14
CENPAP49450 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CENPAP49450 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CENPAP49450 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.2□□□□□ -0.14
CENPAP49450 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CENPAP49450 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CENPAP49450 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CENPAP49450 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CENPAP49450 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CENPAP49450 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.2□□□□□ -0.14
CENPAP49450 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.2□□□□□ -0.14
CENPAP49450 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.2□□□□□ -0.14
CENPAP49450 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CENPAP49450 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CENPAP49450 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CENPAP49450 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CENPAP49450 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CENPAP49450 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.2□□□□□ -0.14
CENPAP49450 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CENPAP49450 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CENPAP49450 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CENPAP49450 AC142381.1-201ENST00000426099 345 ntBASIC14.2□□□□□ -0.14
CENPAP49450 RPS8P6-201ENST00000426177 609 ntBASIC14.2□□□□□ -0.14
CENPAP49450 HTR5BP-201ENST00000430851 1154 ntBASIC14.2□□□□□ -0.14
CENPAP49450 AC005237.2-201ENST00000434368 219 ntBASIC14.2□□□□□ -0.14
CENPAP49450 CEND1P1-201ENST00000451006 455 ntBASIC14.2□□□□□ -0.14
CENPAP49450 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.2□□□□□ -0.14
CENPAP49450 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.2□□□□□ -0.14
CENPAP49450 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
CENPAP49450 MTDHP5-201ENST00000598980 586 ntBASIC14.2□□□□□ -0.14
CENPAP49450 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CENPAP49450 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.2□□□□□ -0.14
CENPAP49450 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.2□□□□□ -0.14
CENPAP49450 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CENPAP49450 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CENPAP49450 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CENPAP49450 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.2□□□□□ -0.14
CENPAP49450 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CENPAP49450 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CENPAP49450 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.2□□□□□ -0.14
CENPAP49450 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.2□□□□□ -0.14
CENPAP49450 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CENPAP49450 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CENPAP49450 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CENPAP49450 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.2□□□□□ -0.14
CENPAP49450 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CENPAP49450 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.2□□□□□ -0.14
CENPAP49450 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CENPAP49450 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CENPAP49450 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CENPAP49450 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CENPAP49450 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CENPAP49450 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.19□□□□□ -0.14
CENPAP49450 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.19□□□□□ -0.14
CENPAP49450 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CENPAP49450 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CENPAP49450 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CENPAP49450 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CENPAP49450 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CENPAP49450 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CENPAP49450 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CENPAP49450 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.19□□□□□ -0.14
CENPAP49450 DMBT1P1-203ENST00000636837 4628 ntBASIC14.19□□□□□ -0.14
CENPAP49450 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CENPAP49450 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CENPAP49450 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
CENPAP49450 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.19□□□□□ -0.14
CENPAP49450 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CENPAP49450 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CENPAP49450 MIR574-201ENST00000385209 96 ntBASIC14.19□□□□□ -0.14
CENPAP49450 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
CENPAP49450 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CENPAP49450 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.19□□□□□ -0.14
CENPAP49450 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CENPAP49450 MCCD1P2-201ENST00000423228 335 ntBASIC14.19□□□□□ -0.14
CENPAP49450 AL645939.2-201ENST00000427340 991 ntBASIC14.19□□□□□ -0.14
CENPAP49450 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.19□□□□□ -0.14
CENPAP49450 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.19□□□□□ -0.14
CENPAP49450 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.19□□□□□ -0.14
CENPAP49450 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.19□□□□□ -0.14
CENPAP49450 AL139010.1-201ENST00000454878 894 ntBASIC14.19□□□□□ -0.14
CENPAP49450 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.19□□□□□ -0.14
CENPAP49450 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.19□□□□□ -0.14
CENPAP49450 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.19□□□□□ -0.14
CENPAP49450 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.19□□□□□ -0.14
CENPAP49450 SLC25A39P2-201ENST00000537614 270 ntBASIC14.19□□□□□ -0.14
CENPAP49450 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.19□□□□□ -0.14
CENPAP49450 KRT8P23-201ENST00000560090 1207 ntBASIC14.19□□□□□ -0.14
CENPAP49450 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.19□□□□□ -0.14
CENPAP49450 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.19□□□□□ -0.14
CENPAP49450 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.19□□□□□ -0.14
CENPAP49450 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms