Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A6P48664 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC1A6P48664 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SLC1A6P48664 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A6P48664 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.34■□□□□ 0.05
SLC1A6P48664 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A6P48664 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
SLC1A6P48664 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC1A6P48664 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A6P48664 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SLC1A6P48664 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A6P48664 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A6P48664 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A6P48664 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC1A6P48664 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC1A6P48664 AC104109.2-201ENST00000602919 1418 ntBASIC15.34■□□□□ 0.05
SLC1A6P48664 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC1A6P48664 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
SLC1A6P48664 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A6P48664 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
SLC1A6P48664 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SLC1A6P48664 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SLC1A6P48664 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC1A6P48664 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC1A6P48664 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC1A6P48664 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SLC1A6P48664 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC1A6P48664 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC1A6P48664 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC1A6P48664 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.05
SLC1A6P48664 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A6P48664 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A6P48664 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A6P48664 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC1A6P48664 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.33■□□□□ 0.04
SLC1A6P48664 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A6P48664 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
SLC1A6P48664 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
SLC1A6P48664 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A6P48664 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.33■□□□□ 0.04
SLC1A6P48664 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC1A6P48664 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.33■□□□□ 0.04
SLC1A6P48664 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A6P48664 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.33■□□□□ 0.04
SLC1A6P48664 AC145285.3-201ENST00000564603 959 ntBASIC15.33■□□□□ 0.04
SLC1A6P48664 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC1A6P48664 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC1A6P48664 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A6P48664 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC1A6P48664 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A6P48664 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
SLC1A6P48664 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC1A6P48664 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A6P48664 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A6P48664 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
SLC1A6P48664 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A6P48664 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A6P48664 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A6P48664 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
SLC1A6P48664 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A6P48664 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
SLC1A6P48664 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
SLC1A6P48664 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A6P48664 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A6P48664 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A6P48664 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A6P48664 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A6P48664 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SLC1A6P48664 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A6P48664 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC1A6P48664 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A6P48664 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A6P48664 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A6P48664 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A6P48664 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A6P48664 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SLC1A6P48664 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC1A6P48664 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A6P48664 AC005840.4-201ENST00000541242 2494 ntBASIC15.32■□□□□ 0.04
SLC1A6P48664 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A6P48664 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
SLC1A6P48664 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A6P48664 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A6P48664 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A6P48664 AL355306.1-201ENST00000415580 579 ntBASIC15.32■□□□□ 0.04
SLC1A6P48664 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A6P48664 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC1A6P48664 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC1A6P48664 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SLC1A6P48664 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC1A6P48664 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.32■□□□□ 0.04
SLC1A6P48664 BX640514.1-201ENST00000583223 1918 ntBASIC15.32■□□□□ 0.04
SLC1A6P48664 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A6P48664 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC1A6P48664 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SLC1A6P48664 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
SLC1A6P48664 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A6P48664 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A6P48664 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A6P48664 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms