Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA4P43681 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA4P43681 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA4P43681 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CHRNA4P43681 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA4P43681 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
CHRNA4P43681 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.68■□□□□ 0.1
CHRNA4P43681 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA4P43681 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA4P43681 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA4P43681 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA4P43681 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA4P43681 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA4P43681 SPDYE19P-201ENST00000338590 713 ntBASIC15.68■□□□□ 0.1
CHRNA4P43681 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA4P43681 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.68■□□□□ 0.1
CHRNA4P43681 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA4P43681 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.68■□□□□ 0.1
CHRNA4P43681 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.68■□□□□ 0.1
CHRNA4P43681 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.68■□□□□ 0.1
CHRNA4P43681 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.68■□□□□ 0.1
CHRNA4P43681 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.68■□□□□ 0.1
CHRNA4P43681 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CHRNA4P43681 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.68■□□□□ 0.1
CHRNA4P43681 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA4P43681 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CHRNA4P43681 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA4P43681 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA4P43681 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CHRNA4P43681 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA4P43681 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA4P43681 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.68■□□□□ 0.1
CHRNA4P43681 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CHRNA4P43681 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA4P43681 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.68■□□□□ 0.1
CHRNA4P43681 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA4P43681 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.68■□□□□ 0.1
CHRNA4P43681 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.68■□□□□ 0.1
CHRNA4P43681 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA4P43681 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA4P43681 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA4P43681 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CHRNA4P43681 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.67■□□□□ 0.1
CHRNA4P43681 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.67■□□□□ 0.1
CHRNA4P43681 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA4P43681 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
CHRNA4P43681 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CHRNA4P43681 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA4P43681 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA4P43681 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA4P43681 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA4P43681 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CHRNA4P43681 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA4P43681 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA4P43681 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA4P43681 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.67■□□□□ 0.1
CHRNA4P43681 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA4P43681 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.67■□□□□ 0.1
CHRNA4P43681 MIR661-201ENST00000384842 89 ntBASIC15.67■□□□□ 0.1
CHRNA4P43681 RPL5P21-201ENST00000404620 815 ntBASIC15.67■□□□□ 0.1
CHRNA4P43681 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.67■□□□□ 0.1
CHRNA4P43681 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.67■□□□□ 0.1
CHRNA4P43681 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.67■□□□□ 0.1
CHRNA4P43681 DOC2GP-202ENST00000514950 1163 ntBASIC15.67■□□□□ 0.1
CHRNA4P43681 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.67■□□□□ 0.1
CHRNA4P43681 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.67■□□□□ 0.1
CHRNA4P43681 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA4P43681 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA4P43681 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA4P43681 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA4P43681 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CHRNA4P43681 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA4P43681 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA4P43681 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA4P43681 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.67■□□□□ 0.1
CHRNA4P43681 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CHRNA4P43681 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CHRNA4P43681 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CHRNA4P43681 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.67■□□□□ 0.1
CHRNA4P43681 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CHRNA4P43681 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA4P43681 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CHRNA4P43681 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CHRNA4P43681 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.67■□□□□ 0.1
CHRNA4P43681 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.67■□□□□ 0.1
CHRNA4P43681 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA4P43681 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.67■□□□□ 0.1
CHRNA4P43681 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA4P43681 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA4P43681 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA4P43681 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CHRNA4P43681 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA4P43681 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
CHRNA4P43681 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA4P43681 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA4P43681 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CHRNA4P43681 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA4P43681 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA4P43681 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.66■□□□□ 0.1
CHRNA4P43681 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms