Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
SSR1P43307 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
SSR1P43307 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SSR1P43307 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SSR1P43307 NIN-202ENST00000324330 4364 ntTSL 5 BASIC16.64■□□□□ 0.25
SSR1P43307 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.64■□□□□ 0.25
SSR1P43307 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSR1P43307 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSR1P43307 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSR1P43307 AC127383.1-201ENST00000444697 1800 ntBASIC16.64■□□□□ 0.25
SSR1P43307 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SSR1P43307 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSR1P43307 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.64■□□□□ 0.25
SSR1P43307 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSR1P43307 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSR1P43307 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.64■□□□□ 0.25
SSR1P43307 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SSR1P43307 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.64■□□□□ 0.25
SSR1P43307 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSR1P43307 MTND6P24-201ENST00000440466 518 ntBASIC16.64■□□□□ 0.25
SSR1P43307 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.64■□□□□ 0.25
SSR1P43307 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.64■□□□□ 0.25
SSR1P43307 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SSR1P43307 AC105021.1-202ENST00000570572 669 ntBASIC16.64■□□□□ 0.25
SSR1P43307 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
SSR1P43307 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.64■□□□□ 0.25
SSR1P43307 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
SSR1P43307 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SSR1P43307 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSR1P43307 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSR1P43307 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSR1P43307 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.64■□□□□ 0.25
SSR1P43307 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.64■□□□□ 0.25
SSR1P43307 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSR1P43307 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.64■□□□□ 0.25
SSR1P43307 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSR1P43307 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SSR1P43307 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.64■□□□□ 0.25
SSR1P43307 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.64■□□□□ 0.25
SSR1P43307 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 AC023157.3-201ENST00000619086 2088 ntBASIC16.63■□□□□ 0.25
SSR1P43307 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SSR1P43307 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.63■□□□□ 0.25
SSR1P43307 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
SSR1P43307 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.63■□□□□ 0.25
SSR1P43307 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.63■□□□□ 0.25
SSR1P43307 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SSR1P43307 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
SSR1P43307 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.63■□□□□ 0.25
SSR1P43307 RPSAP43-201ENST00000402237 625 ntBASIC16.63■□□□□ 0.25
SSR1P43307 AC211486.1-202ENST00000416371 468 ntBASIC16.63■□□□□ 0.25
SSR1P43307 UPF3AP3-201ENST00000420996 769 ntBASIC16.63■□□□□ 0.25
SSR1P43307 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.63■□□□□ 0.25
SSR1P43307 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.63■□□□□ 0.25
SSR1P43307 AC211476.1-201ENST00000503899 468 ntBASIC16.63■□□□□ 0.25
SSR1P43307 YBX1P5-201ENST00000509441 847 ntBASIC16.63■□□□□ 0.25
SSR1P43307 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.63■□□□□ 0.25
SSR1P43307 AC093520.2-201ENST00000561830 333 ntBASIC16.63■□□□□ 0.25
SSR1P43307 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.63■□□□□ 0.25
SSR1P43307 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.63■□□□□ 0.25
SSR1P43307 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.63■□□□□ 0.25
SSR1P43307 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.63■□□□□ 0.25
SSR1P43307 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SSR1P43307 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
SSR1P43307 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.63■□□□□ 0.25
SSR1P43307 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.63■□□□□ 0.25
SSR1P43307 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SSR1P43307 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
SSR1P43307 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
SSR1P43307 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSR1P43307 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms