Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A3P43003 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A3P43003 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC1A3P43003 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A3P43003 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.35□□□□□ -0.11
SLC1A3P43003 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A3P43003 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A3P43003 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SLC1A3P43003 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
SLC1A3P43003 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A3P43003 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A3P43003 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A3P43003 AC026748.1-201ENST00000624349 3251 ntBASIC14.35□□□□□ -0.11
SLC1A3P43003 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A3P43003 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A3P43003 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A3P43003 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.35□□□□□ -0.11
SLC1A3P43003 TARDBPP1-201ENST00000442013 1203 ntBASIC14.35□□□□□ -0.11
SLC1A3P43003 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC1A3P43003 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.35□□□□□ -0.11
SLC1A3P43003 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A3P43003 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.35□□□□□ -0.11
SLC1A3P43003 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC1A3P43003 TEX28P1-201ENST00000613479 1221 ntBASIC14.35□□□□□ -0.11
SLC1A3P43003 TEX28P2-201ENST00000617764 1221 ntBASIC14.35□□□□□ -0.11
SLC1A3P43003 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
SLC1A3P43003 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SLC1A3P43003 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A3P43003 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A3P43003 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SLC1A3P43003 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.35□□□□□ -0.11
SLC1A3P43003 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC1A3P43003 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC1A3P43003 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SLC1A3P43003 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A3P43003 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC1A3P43003 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A3P43003 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.35□□□□□ -0.11
SLC1A3P43003 KRT18P28-201ENST00000453838 1332 ntBASIC14.35□□□□□ -0.11
SLC1A3P43003 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A3P43003 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A3P43003 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.35□□□□□ -0.11
SLC1A3P43003 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A3P43003 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.35□□□□□ -0.11
SLC1A3P43003 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A3P43003 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A3P43003 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A3P43003 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC1A3P43003 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC1A3P43003 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A3P43003 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A3P43003 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A3P43003 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A3P43003 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SLC1A3P43003 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A3P43003 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A3P43003 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A3P43003 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC1A3P43003 AC009090.5-201ENST00000624886 2285 ntBASIC14.34□□□□□ -0.11
SLC1A3P43003 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A3P43003 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A3P43003 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC1A3P43003 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A3P43003 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC1A3P43003 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A3P43003 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A3P43003 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SLC1A3P43003 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A3P43003 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.34□□□□□ -0.11
SLC1A3P43003 PMS2P2-201ENST00000425039 1128 ntBASIC14.34□□□□□ -0.11
SLC1A3P43003 METTL21AP1-201ENST00000438852 635 ntBASIC14.34□□□□□ -0.11
SLC1A3P43003 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A3P43003 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.34□□□□□ -0.11
SLC1A3P43003 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC1A3P43003 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.34□□□□□ -0.11
SLC1A3P43003 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.34□□□□□ -0.11
SLC1A3P43003 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.34□□□□□ -0.11
SLC1A3P43003 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.34□□□□□ -0.11
SLC1A3P43003 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC1A3P43003 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC1A3P43003 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A3P43003 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.34□□□□□ -0.11
SLC1A3P43003 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.34□□□□□ -0.11
SLC1A3P43003 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A3P43003 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
SLC1A3P43003 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC1A3P43003 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC1A3P43003 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SLC1A3P43003 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A3P43003 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A3P43003 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC1A3P43003 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A3P43003 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A3P43003 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A3P43003 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC1A3P43003 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC1A3P43003 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC1A3P43003 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC1A3P43003 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.34□□□□□ -0.11
SLC1A3P43003 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms