Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SNCAP37840 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNCAP37840 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.88□□□□□ -0.35
SNCAP37840 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC12.88□□□□□ -0.35
SNCAP37840 PMS2P7-201ENST00000506558 1336 ntBASIC12.88□□□□□ -0.35
SNCAP37840 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SNCAP37840 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
SNCAP37840 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.87□□□□□ -0.35
SNCAP37840 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SNCAP37840 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SNCAP37840 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.87□□□□□ -0.35
SNCAP37840 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.87□□□□□ -0.35
SNCAP37840 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SNCAP37840 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SNCAP37840 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SNCAP37840 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SNCAP37840 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.87□□□□□ -0.35
SNCAP37840 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 RPL28-209ENST00000560055 670 ntTSL 3 BASIC12.87□□□□□ -0.35
SNCAP37840 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC12.87□□□□□ -0.35
SNCAP37840 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.87□□□□□ -0.35
SNCAP37840 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.87□□□□□ -0.35
SNCAP37840 CD7-202ENST00000578509 925 ntTSL 3 BASIC12.87□□□□□ -0.35
SNCAP37840 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
SNCAP37840 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.87□□□□□ -0.35
SNCAP37840 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SNCAP37840 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
SNCAP37840 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SNCAP37840 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.87□□□□□ -0.35
SNCAP37840 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 AC136759.1-202ENST00000530858 2194 ntBASIC12.87□□□□□ -0.35
SNCAP37840 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SNCAP37840 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.87□□□□□ -0.35
SNCAP37840 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
SNCAP37840 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SNCAP37840 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNCAP37840 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNCAP37840 LINC01230-201ENST00000625222 3017 ntBASIC12.86□□□□□ -0.35
SNCAP37840 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNCAP37840 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.86□□□□□ -0.35
SNCAP37840 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
SNCAP37840 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNCAP37840 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNCAP37840 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.86□□□□□ -0.35
SNCAP37840 AP001282.1-201ENST00000531301 1499 ntBASIC12.86□□□□□ -0.35
SNCAP37840 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNCAP37840 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.86□□□□□ -0.35
SNCAP37840 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SNCAP37840 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNCAP37840 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNCAP37840 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SNCAP37840 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNCAP37840 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
SNCAP37840 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.86□□□□□ -0.35
SNCAP37840 DDT-204ENST00000404092 805 ntTSL 3 BASIC12.86□□□□□ -0.35
SNCAP37840 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC12.86□□□□□ -0.35
SNCAP37840 AC092474.2-201ENST00000424288 719 ntBASIC12.86□□□□□ -0.35
SNCAP37840 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SNCAP37840 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.86□□□□□ -0.35
SNCAP37840 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SNCAP37840 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC12.86□□□□□ -0.35
SNCAP37840 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
SNCAP37840 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.86□□□□□ -0.35
SNCAP37840 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.86□□□□□ -0.35
SNCAP37840 AL691432.3-201ENST00000621860 400 ntBASIC12.86□□□□□ -0.35
SNCAP37840 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms