Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6BP35913 UFM1-202ENST00000379649 846 ntTSL 4 BASIC18.93■□□□□ 0.62
PDE6BP35913 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6BP35913 SLC16A6P1-201ENST00000413214 1059 ntBASIC18.93■□□□□ 0.62
PDE6BP35913 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6BP35913 PARVG-202ENST00000415224 999 ntTSL 2 BASIC18.93■□□□□ 0.62
PDE6BP35913 AC006335.1-201ENST00000445200 547 ntBASIC18.93■□□□□ 0.62
PDE6BP35913 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC18.93■□□□□ 0.62
PDE6BP35913 AC234782.1-201ENST00000451950 919 ntBASIC18.93■□□□□ 0.62
PDE6BP35913 AC104073.2-201ENST00000453737 312 ntBASIC18.93■□□□□ 0.62
PDE6BP35913 MARK2P5-201ENST00000507649 634 ntBASIC18.93■□□□□ 0.62
PDE6BP35913 CENPX-208ENST00000584347 799 ntTSL 2 BASIC18.93■□□□□ 0.62
PDE6BP35913 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6BP35913 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6BP35913 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6BP35913 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.93■□□□□ 0.62
PDE6BP35913 CLUHP2-201ENST00000426660 1303 ntBASIC18.93■□□□□ 0.62
PDE6BP35913 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6BP35913 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PDE6BP35913 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
PDE6BP35913 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.93■□□□□ 0.62
PDE6BP35913 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6BP35913 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6BP35913 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6BP35913 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDE6BP35913 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE6BP35913 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PDE6BP35913 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE6BP35913 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE6BP35913 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE6BP35913 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE6BP35913 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.92■□□□□ 0.62
PDE6BP35913 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PDE6BP35913 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE6BP35913 AC004899.1-201ENST00000424687 1714 ntBASIC18.92■□□□□ 0.62
PDE6BP35913 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PDE6BP35913 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.92■□□□□ 0.62
PDE6BP35913 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE6BP35913 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PDE6BP35913 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE6BP35913 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.92■□□□□ 0.62
PDE6BP35913 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDE6BP35913 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC18.92■□□□□ 0.62
PDE6BP35913 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDE6BP35913 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE6BP35913 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC18.92■□□□□ 0.62
PDE6BP35913 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
PDE6BP35913 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC18.92■□□□□ 0.62
PDE6BP35913 MESTP3-201ENST00000503460 968 ntBASIC18.92■□□□□ 0.62
PDE6BP35913 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDE6BP35913 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC18.92■□□□□ 0.62
PDE6BP35913 AF254983.2-201ENST00000612331 135 ntBASIC18.92■□□□□ 0.62
PDE6BP35913 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PDE6BP35913 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE6BP35913 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.92■□□□□ 0.62
PDE6BP35913 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE6BP35913 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDE6BP35913 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE6BP35913 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PDE6BP35913 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE6BP35913 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE6BP35913 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.92■□□□□ 0.62
PDE6BP35913 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PDE6BP35913 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDE6BP35913 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDE6BP35913 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDE6BP35913 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDE6BP35913 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PDE6BP35913 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDE6BP35913 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDE6BP35913 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDE6BP35913 AC084364.1-201ENST00000551967 1556 ntBASIC18.91■□□□□ 0.62
PDE6BP35913 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDE6BP35913 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDE6BP35913 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC18.91■□□□□ 0.62
PDE6BP35913 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDE6BP35913 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC18.91■□□□□ 0.62
PDE6BP35913 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDE6BP35913 AC018635.2-201ENST00000608625 364 ntBASIC18.91■□□□□ 0.62
PDE6BP35913 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC18.91■□□□□ 0.62
PDE6BP35913 AP000346.4-201ENST00000614827 381 ntBASIC18.91■□□□□ 0.62
PDE6BP35913 AL136295.7-201ENST00000619226 1200 ntBASIC18.91■□□□□ 0.62
PDE6BP35913 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC18.91■□□□□ 0.62
PDE6BP35913 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC18.91■□□□□ 0.62
PDE6BP35913 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDE6BP35913 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PDE6BP35913 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDE6BP35913 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDE6BP35913 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDE6BP35913 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDE6BP35913 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC18.91■□□□□ 0.62
PDE6BP35913 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDE6BP35913 AC055811.4-201ENST00000624039 1754 ntBASIC18.91■□□□□ 0.62
PDE6BP35913 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDE6BP35913 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.9■□□□□ 0.62
PDE6BP35913 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDE6BP35913 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDE6BP35913 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
PDE6BP35913 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.9■□□□□ 0.62
PDE6BP35913 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms