Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RORAP35398 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
RORAP35398 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.8□□□□□ -0.04
RORAP35398 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RORAP35398 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RORAP35398 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.8□□□□□ -0.04
RORAP35398 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.8□□□□□ -0.04
RORAP35398 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RORAP35398 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RORAP35398 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RORAP35398 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RORAP35398 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.8□□□□□ -0.04
RORAP35398 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RORAP35398 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RORAP35398 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RORAP35398 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RORAP35398 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.79□□□□□ -0.04
RORAP35398 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RORAP35398 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
RORAP35398 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RORAP35398 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
RORAP35398 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RORAP35398 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RORAP35398 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RORAP35398 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RORAP35398 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RORAP35398 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RORAP35398 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RORAP35398 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RORAP35398 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RORAP35398 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.79□□□□□ -0.04
RORAP35398 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.79□□□□□ -0.04
RORAP35398 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RORAP35398 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RORAP35398 AL133267.1-201ENST00000398220 340 ntBASIC14.79□□□□□ -0.04
RORAP35398 BOLA2P3-201ENST00000404566 256 ntBASIC14.79□□□□□ -0.04
RORAP35398 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RORAP35398 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RORAP35398 CROCCP4-201ENST00000457096 498 ntBASIC14.79□□□□□ -0.04
RORAP35398 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.79□□□□□ -0.04
RORAP35398 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.79□□□□□ -0.04
RORAP35398 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.79□□□□□ -0.04
RORAP35398 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RORAP35398 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RORAP35398 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.79□□□□□ -0.04
RORAP35398 TDH-203ENST00000531764 1110 ntBASIC14.79□□□□□ -0.04
RORAP35398 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.79□□□□□ -0.04
RORAP35398 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RORAP35398 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.79□□□□□ -0.04
RORAP35398 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RORAP35398 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.79□□□□□ -0.04
RORAP35398 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.79□□□□□ -0.04
RORAP35398 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.79□□□□□ -0.04
RORAP35398 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RORAP35398 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.79□□□□□ -0.04
RORAP35398 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.79□□□□□ -0.04
RORAP35398 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.79□□□□□ -0.04
RORAP35398 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.79□□□□□ -0.04
RORAP35398 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.79□□□□□ -0.04
RORAP35398 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RORAP35398 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RORAP35398 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RORAP35398 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RORAP35398 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RORAP35398 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RORAP35398 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RORAP35398 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.78□□□□□ -0.04
RORAP35398 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RORAP35398 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RORAP35398 AC022188.1-201ENST00000620960 1664 ntBASIC14.78□□□□□ -0.04
RORAP35398 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.78□□□□□ -0.04
RORAP35398 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RORAP35398 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RORAP35398 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RORAP35398 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.78□□□□□ -0.04
RORAP35398 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RORAP35398 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.78□□□□□ -0.04
RORAP35398 LINC02199-201ENST00000506655 2702 ntBASIC14.78□□□□□ -0.04
RORAP35398 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RORAP35398 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RORAP35398 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.78□□□□□ -0.04
RORAP35398 KRT43P-201ENST00000434019 910 ntBASIC14.78□□□□□ -0.04
RORAP35398 RPS2P32-201ENST00000439199 892 ntBASIC14.78□□□□□ -0.04
RORAP35398 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RORAP35398 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.78□□□□□ -0.04
RORAP35398 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RORAP35398 AC026410.3-201ENST00000514280 936 ntBASIC14.78□□□□□ -0.04
RORAP35398 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RORAP35398 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.78□□□□□ -0.04
RORAP35398 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RORAP35398 SNX29P1-201ENST00000548357 1007 ntBASIC14.78□□□□□ -0.04
RORAP35398 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.78□□□□□ -0.04
RORAP35398 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.78□□□□□ -0.04
RORAP35398 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.78□□□□□ -0.04
RORAP35398 MIR4259-201ENST00000584466 101 ntBASIC14.78□□□□□ -0.04
RORAP35398 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.78□□□□□ -0.04
RORAP35398 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.78□□□□□ -0.04
RORAP35398 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.78□□□□□ -0.04
RORAP35398 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.78□□□□□ -0.04
RORAP35398 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms