Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP6P35125 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP6P35125 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC20.58■□□□□ 0.89
USP6P35125 AL137783.1-201ENST00000623494 1896 ntBASIC20.58■□□□□ 0.89
USP6P35125 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP6P35125 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC20.58■□□□□ 0.89
USP6P35125 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
USP6P35125 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
USP6P35125 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP6P35125 BANP-204ENST00000393208 2283 ntTSL 2 BASIC20.58■□□□□ 0.88
USP6P35125 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC20.58■□□□□ 0.88
USP6P35125 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP6P35125 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
USP6P35125 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
USP6P35125 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP6P35125 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
USP6P35125 GGCT-203ENST00000409144 836 ntTSL 2 BASIC20.58■□□□□ 0.88
USP6P35125 AL008707.1-201ENST00000422498 534 ntBASIC20.58■□□□□ 0.88
USP6P35125 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP6P35125 AC021723.1-201ENST00000486306 515 ntBASIC20.58■□□□□ 0.88
USP6P35125 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
USP6P35125 NUP210P1-202ENST00000504322 710 ntBASIC20.58■□□□□ 0.88
USP6P35125 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
USP6P35125 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
USP6P35125 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC20.58■□□□□ 0.88
USP6P35125 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC20.58■□□□□ 0.88
USP6P35125 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP6P35125 AL136301.1-201ENST00000615830 422 ntBASIC20.58■□□□□ 0.88
USP6P35125 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP6P35125 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
USP6P35125 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP6P35125 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP6P35125 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP6P35125 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
USP6P35125 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP6P35125 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP6P35125 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.58■□□□□ 0.88
USP6P35125 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP6P35125 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC20.58■□□□□ 0.88
USP6P35125 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.58■□□□□ 0.88
USP6P35125 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP6P35125 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
USP6P35125 AP005117.1-202ENST00000581724 1908 ntBASIC20.58■□□□□ 0.88
USP6P35125 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC20.57■□□□□ 0.88
USP6P35125 SHC1P1-201ENST00000425230 1745 ntBASIC20.57■□□□□ 0.88
USP6P35125 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP6P35125 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
USP6P35125 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
USP6P35125 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC20.57■□□□□ 0.88
USP6P35125 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC20.57■□□□□ 0.88
USP6P35125 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP6P35125 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP6P35125 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP6P35125 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP6P35125 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP6P35125 SLC16A6P1-201ENST00000413214 1059 ntBASIC20.57■□□□□ 0.88
USP6P35125 HINT2P1-201ENST00000419438 481 ntBASIC20.57■□□□□ 0.88
USP6P35125 AC007274.2-201ENST00000421675 662 ntBASIC20.57■□□□□ 0.88
USP6P35125 CDC23-208ENST00000505120 455 ntTSL 3 BASIC20.57■□□□□ 0.88
USP6P35125 AC100757.4-201ENST00000626934 759 ntBASIC20.57■□□□□ 0.88
USP6P35125 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP6P35125 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP6P35125 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC20.57■□□□□ 0.88
USP6P35125 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.57■□□□□ 0.88
USP6P35125 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP6P35125 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
USP6P35125 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
USP6P35125 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC20.57■□□□□ 0.88
USP6P35125 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP6P35125 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP6P35125 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
USP6P35125 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC20.57■□□□□ 0.88
USP6P35125 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP6P35125 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
USP6P35125 AC090616.6-203ENST00000579186 1945 ntBASIC20.56■□□□□ 0.88
USP6P35125 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC20.56■□□□□ 0.88
USP6P35125 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC20.56■□□□□ 0.88
USP6P35125 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP6P35125 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP6P35125 RBM38-204ENST00000371219 760 ntTSL 2 BASIC20.56■□□□□ 0.88
USP6P35125 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP6P35125 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC20.56■□□□□ 0.88
USP6P35125 AC011742.3-201ENST00000439053 820 ntBASIC20.56■□□□□ 0.88
USP6P35125 MSRA-203ENST00000441698 788 ntTSL 2 BASIC20.56■□□□□ 0.88
USP6P35125 TUBB8P8-201ENST00000458717 1058 ntBASIC20.56■□□□□ 0.88
USP6P35125 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC20.56■□□□□ 0.88
USP6P35125 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
USP6P35125 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP6P35125 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
USP6P35125 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP6P35125 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
USP6P35125 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
USP6P35125 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
USP6P35125 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP6P35125 AP003680.1-201ENST00000598970 3660 ntBASIC20.56■□□□□ 0.88
USP6P35125 PES1-204ENST00000402284 2144 ntTSL 5 BASIC20.56■□□□□ 0.88
USP6P35125 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP6P35125 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP6P35125 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP6P35125 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms