Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
CKS2P33552 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
CKS2P33552 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
CKS2P33552 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC11.51□□□□□ -0.57
CKS2P33552 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
CKS2P33552 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC11.51□□□□□ -0.57
CKS2P33552 AL137784.3-201ENST00000623858 2288 ntBASIC11.51□□□□□ -0.57
CKS2P33552 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC11.51□□□□□ -0.57
CKS2P33552 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC11.51□□□□□ -0.57
CKS2P33552 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC11.51□□□□□ -0.57
CKS2P33552 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
CKS2P33552 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 RNU1-129P-201ENST00000384064 167 ntBASIC11.51□□□□□ -0.57
CKS2P33552 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC11.51□□□□□ -0.57
CKS2P33552 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC11.51□□□□□ -0.57
CKS2P33552 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC11.51□□□□□ -0.57
CKS2P33552 U1.21-201ENST00000580816 167 ntBASIC11.51□□□□□ -0.57
CKS2P33552 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
CKS2P33552 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
CKS2P33552 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC11.51□□□□□ -0.57
CKS2P33552 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC11.51□□□□□ -0.57
CKS2P33552 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC11.51□□□□□ -0.57
CKS2P33552 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC11.51□□□□□ -0.57
CKS2P33552 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 WASH3P-207ENST00000560956 1394 ntBASIC11.51□□□□□ -0.57
CKS2P33552 FO538757.1-201ENST00000623083 1397 ntBASIC11.51□□□□□ -0.57
CKS2P33552 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
CKS2P33552 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC11.51□□□□□ -0.57
CKS2P33552 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
CKS2P33552 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC11.51□□□□□ -0.57
CKS2P33552 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC11.51□□□□□ -0.57
CKS2P33552 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC11.51□□□□□ -0.57
CKS2P33552 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS2P33552 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC11.5□□□□□ -0.57
CKS2P33552 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC11.5□□□□□ -0.57
CKS2P33552 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS2P33552 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC11.5□□□□□ -0.57
CKS2P33552 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CKS2P33552 AC006504.4-201ENST00000592118 1568 ntBASIC11.5□□□□□ -0.57
CKS2P33552 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS2P33552 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC11.5□□□□□ -0.57
CKS2P33552 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
CKS2P33552 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
CKS2P33552 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS2P33552 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS2P33552 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS2P33552 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC11.5□□□□□ -0.57
CKS2P33552 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC11.5□□□□□ -0.57
CKS2P33552 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
CKS2P33552 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
CKS2P33552 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS2P33552 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC11.5□□□□□ -0.57
CKS2P33552 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS2P33552 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS2P33552 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC11.5□□□□□ -0.57
CKS2P33552 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC11.5□□□□□ -0.57
CKS2P33552 RBM17P3-201ENST00000417687 1192 ntBASIC11.5□□□□□ -0.57
CKS2P33552 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC11.5□□□□□ -0.57
CKS2P33552 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CKS2P33552 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS2P33552 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC11.5□□□□□ -0.57
CKS2P33552 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
CKS2P33552 AC106795.1-205ENST00000512851 1056 ntBASIC11.5□□□□□ -0.57
CKS2P33552 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC11.5□□□□□ -0.57
CKS2P33552 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC11.5□□□□□ -0.57
CKS2P33552 QPRT-203ENST00000562473 579 ntTSL 3 BASIC11.5□□□□□ -0.57
CKS2P33552 MIR3909-201ENST00000579518 119 ntBASIC11.5□□□□□ -0.57
CKS2P33552 MIR4515-201ENST00000584082 81 ntBASIC11.5□□□□□ -0.57
CKS2P33552 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC11.5□□□□□ -0.57
CKS2P33552 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS2P33552 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC11.5□□□□□ -0.57
CKS2P33552 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC11.5□□□□□ -0.57
CKS2P33552 AC097493.4-201ENST00000641197 219 ntBASIC11.5□□□□□ -0.57
CKS2P33552 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms