Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB3BP20337 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB3BP20337 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB3BP20337 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB3BP20337 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.69□□□□□ -0.22
RAB3BP20337 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.69□□□□□ -0.22
RAB3BP20337 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB3BP20337 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB3BP20337 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB3BP20337 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB3BP20337 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB3BP20337 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB3BP20337 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB3BP20337 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.69□□□□□ -0.22
RAB3BP20337 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB3BP20337 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB3BP20337 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB3BP20337 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RAB3BP20337 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB3BP20337 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB3BP20337 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.69□□□□□ -0.22
RAB3BP20337 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB3BP20337 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB3BP20337 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB3BP20337 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RAB3BP20337 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB3BP20337 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB3BP20337 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.69□□□□□ -0.22
RAB3BP20337 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB3BP20337 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RAB3BP20337 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB3BP20337 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RAB3BP20337 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.69□□□□□ -0.22
RAB3BP20337 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB3BP20337 PHKG1P2-201ENST00000457537 863 ntBASIC13.69□□□□□ -0.22
RAB3BP20337 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB3BP20337 RNPS1P1-201ENST00000507437 918 ntBASIC13.69□□□□□ -0.22
RAB3BP20337 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB3BP20337 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.69□□□□□ -0.22
RAB3BP20337 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB3BP20337 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
RAB3BP20337 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB3BP20337 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB3BP20337 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RAB3BP20337 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RAB3BP20337 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB3BP20337 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB3BP20337 AC027601.5-201ENST00000624065 2482 ntBASIC13.69□□□□□ -0.22
RAB3BP20337 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB3BP20337 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RAB3BP20337 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB3BP20337 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB3BP20337 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RAB3BP20337 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB3BP20337 AC005252.3-201ENST00000623855 2258 ntBASIC13.69□□□□□ -0.22
RAB3BP20337 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB3BP20337 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB3BP20337 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB3BP20337 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB3BP20337 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB3BP20337 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB3BP20337 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB3BP20337 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB3BP20337 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.68□□□□□ -0.22
RAB3BP20337 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB3BP20337 AC138969.2-201ENST00000532739 9932 ntBASIC13.68□□□□□ -0.22
RAB3BP20337 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB3BP20337 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
RAB3BP20337 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB3BP20337 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.68□□□□□ -0.22
RAB3BP20337 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB3BP20337 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB3BP20337 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.68□□□□□ -0.22
RAB3BP20337 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RAB3BP20337 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
RAB3BP20337 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
RAB3BP20337 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.68□□□□□ -0.22
RAB3BP20337 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.68□□□□□ -0.22
RAB3BP20337 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.68□□□□□ -0.22
RAB3BP20337 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB3BP20337 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.68□□□□□ -0.22
RAB3BP20337 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB3BP20337 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RAB3BP20337 AC098859.1-201ENST00000502915 1238 ntBASIC13.68□□□□□ -0.22
RAB3BP20337 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.68□□□□□ -0.22
RAB3BP20337 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.68□□□□□ -0.22
RAB3BP20337 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB3BP20337 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
RAB3BP20337 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.68□□□□□ -0.22
RAB3BP20337 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.68□□□□□ -0.22
RAB3BP20337 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.68□□□□□ -0.22
RAB3BP20337 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.68□□□□□ -0.22
RAB3BP20337 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.68□□□□□ -0.22
RAB3BP20337 AL359183.1-201ENST00000623796 2132 ntBASIC13.68□□□□□ -0.22
RAB3BP20337 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.68□□□□□ -0.22
RAB3BP20337 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB3BP20337 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RAB3BP20337 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB3BP20337 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB3BP20337 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms