Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCLP19338 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NCLP19338 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
NCLP19338 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
NCLP19338 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCLP19338 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NCLP19338 AC025580.3-201ENST00000617932 1424 ntBASIC18.64■□□□□ 0.57
NCLP19338 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCLP19338 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
NCLP19338 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
NCLP19338 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.64■□□□□ 0.57
NCLP19338 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
NCLP19338 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NCLP19338 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC18.64■□□□□ 0.57
NCLP19338 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCLP19338 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
NCLP19338 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
NCLP19338 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.63■□□□□ 0.57
NCLP19338 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCLP19338 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NCLP19338 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC18.63■□□□□ 0.57
NCLP19338 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC18.63■□□□□ 0.57
NCLP19338 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NCLP19338 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
NCLP19338 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCLP19338 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCLP19338 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCLP19338 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCLP19338 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.63■□□□□ 0.57
NCLP19338 HTR5BP-201ENST00000430851 1154 ntBASIC18.63■□□□□ 0.57
NCLP19338 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.63■□□□□ 0.57
NCLP19338 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.63■□□□□ 0.57
NCLP19338 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NCLP19338 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
NCLP19338 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.63■□□□□ 0.57
NCLP19338 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.63■□□□□ 0.57
NCLP19338 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.63■□□□□ 0.57
NCLP19338 AL078644.1-201ENST00000609881 752 ntBASIC18.63■□□□□ 0.57
NCLP19338 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCLP19338 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.63■□□□□ 0.57
NCLP19338 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCLP19338 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCLP19338 LINC00552-201ENST00000625151 2579 ntBASIC18.63■□□□□ 0.57
NCLP19338 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
NCLP19338 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NCLP19338 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
NCLP19338 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCLP19338 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NCLP19338 AC073439.1-201ENST00000624121 1774 ntBASIC18.63■□□□□ 0.57
NCLP19338 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.63■□□□□ 0.57
NCLP19338 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCLP19338 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NCLP19338 AC112693.3-201ENST00000624819 1983 ntBASIC18.62■□□□□ 0.57
NCLP19338 PPP1R26P4-201ENST00000619065 3527 ntBASIC18.62■□□□□ 0.57
NCLP19338 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCLP19338 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCLP19338 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NCLP19338 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC18.62■□□□□ 0.57
NCLP19338 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCLP19338 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCLP19338 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCLP19338 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCLP19338 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
NCLP19338 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCLP19338 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCLP19338 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCLP19338 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.62■□□□□ 0.57
NCLP19338 DNAJB3-202ENST00000449667 1266 ntBASIC18.62■□□□□ 0.57
NCLP19338 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.62■□□□□ 0.57
NCLP19338 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCLP19338 MIR4469-201ENST00000583919 79 ntBASIC18.62■□□□□ 0.57
NCLP19338 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.62■□□□□ 0.57
NCLP19338 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.62■□□□□ 0.57
NCLP19338 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.62■□□□□ 0.57
NCLP19338 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCLP19338 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCLP19338 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
NCLP19338 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NCLP19338 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCLP19338 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
NCLP19338 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.62■□□□□ 0.57
NCLP19338 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC18.62■□□□□ 0.57
NCLP19338 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCLP19338 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCLP19338 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NCLP19338 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NCLP19338 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCLP19338 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NCLP19338 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NCLP19338 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCLP19338 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
NCLP19338 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NCLP19338 AC087386.2-201ENST00000623212 4637 ntBASIC18.61■□□□□ 0.57
NCLP19338 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCLP19338 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NCLP19338 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCLP19338 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC18.61■□□□□ 0.57
NCLP19338 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCLP19338 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCLP19338 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms