Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC20.98■□□□□ 0.95
ATF3P18847 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATF3P18847 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATF3P18847 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC20.98■□□□□ 0.95
ATF3P18847 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC20.98■□□□□ 0.95
ATF3P18847 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC20.98■□□□□ 0.95
ATF3P18847 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC20.98■□□□□ 0.95
ATF3P18847 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC20.98■□□□□ 0.95
ATF3P18847 DUX4L47-201ENST00000566374 394 ntBASIC20.98■□□□□ 0.95
ATF3P18847 AC026803.1-201ENST00000569130 274 ntBASIC20.98■□□□□ 0.95
ATF3P18847 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC20.98■□□□□ 0.95
ATF3P18847 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.98■□□□□ 0.95
ATF3P18847 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATF3P18847 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATF3P18847 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATF3P18847 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.98■□□□□ 0.95
ATF3P18847 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATF3P18847 CAP2P1-201ENST00000557743 1390 ntBASIC20.97■□□□□ 0.95
ATF3P18847 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATF3P18847 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATF3P18847 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC20.97■□□□□ 0.95
ATF3P18847 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ATF3P18847 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATF3P18847 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATF3P18847 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATF3P18847 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATF3P18847 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATF3P18847 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
ATF3P18847 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATF3P18847 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
ATF3P18847 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATF3P18847 AC010141.1-201ENST00000411585 623 ntBASIC20.97■□□□□ 0.95
ATF3P18847 RPL8P2-201ENST00000430538 502 ntBASIC20.97■□□□□ 0.95
ATF3P18847 AC012362.1-201ENST00000434906 739 ntBASIC20.97■□□□□ 0.95
ATF3P18847 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC20.97■□□□□ 0.95
ATF3P18847 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC20.97■□□□□ 0.95
ATF3P18847 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC20.97■□□□□ 0.95
ATF3P18847 AC007881.3-201ENST00000608897 607 ntBASIC20.97■□□□□ 0.95
ATF3P18847 AC127024.7-201ENST00000625101 200 ntBASIC20.97■□□□□ 0.95
ATF3P18847 AL645728.2-202ENST00000641679 227 ntBASIC20.97■□□□□ 0.95
ATF3P18847 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATF3P18847 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATF3P18847 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATF3P18847 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATF3P18847 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATF3P18847 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATF3P18847 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATF3P18847 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
ATF3P18847 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATF3P18847 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATF3P18847 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
ATF3P18847 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATF3P18847 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC20.97■□□□□ 0.95
ATF3P18847 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ATF3P18847 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATF3P18847 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC20.96■□□□□ 0.95
ATF3P18847 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATF3P18847 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
ATF3P18847 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATF3P18847 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC20.96■□□□□ 0.95
ATF3P18847 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC20.96■□□□□ 0.95
ATF3P18847 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC20.96■□□□□ 0.95
ATF3P18847 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATF3P18847 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ATF3P18847 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.96■□□□□ 0.95
ATF3P18847 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATF3P18847 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATF3P18847 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATF3P18847 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATF3P18847 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.96■□□□□ 0.95
ATF3P18847 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC20.95■□□□□ 0.95
ATF3P18847 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
ATF3P18847 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.95
ATF3P18847 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.95■□□□□ 0.95
ATF3P18847 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATF3P18847 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATF3P18847 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATF3P18847 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
ATF3P18847 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATF3P18847 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATF3P18847 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20.95■□□□□ 0.94
ATF3P18847 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ATF3P18847 AL592076.1-201ENST00000424448 303 ntBASIC20.95■□□□□ 0.94
ATF3P18847 NAGK-204ENST00000443872 878 ntTSL 3 BASIC20.95■□□□□ 0.94
ATF3P18847 AC012441.2-201ENST00000444843 739 ntBASIC20.95■□□□□ 0.94
ATF3P18847 AC008723.1-201ENST00000506922 207 ntBASIC20.95■□□□□ 0.94
ATF3P18847 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC20.95■□□□□ 0.94
ATF3P18847 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC20.95■□□□□ 0.94
ATF3P18847 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC20.95■□□□□ 0.94
ATF3P18847 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC20.95■□□□□ 0.94
ATF3P18847 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC20.95■□□□□ 0.94
ATF3P18847 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ATF3P18847 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC20.95■□□□□ 0.94
ATF3P18847 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ATF3P18847 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATF3P18847 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATF3P18847 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
ATF3P18847 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
ATF3P18847 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
ATF3P18847 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms