Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
BMP3P12645 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
BMP3P12645 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BMP3P12645 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.82■□□□□ 0.44
BMP3P12645 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.82■□□□□ 0.44
BMP3P12645 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.82■□□□□ 0.44
BMP3P12645 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.82■□□□□ 0.44
BMP3P12645 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
BMP3P12645 AC138951.2-201ENST00000623455 1161 ntBASIC17.82■□□□□ 0.44
BMP3P12645 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BMP3P12645 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
BMP3P12645 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.82■□□□□ 0.44
BMP3P12645 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
BMP3P12645 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BMP3P12645 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.82■□□□□ 0.44
BMP3P12645 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BMP3P12645 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BMP3P12645 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.82■□□□□ 0.44
BMP3P12645 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.82■□□□□ 0.44
BMP3P12645 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
BMP3P12645 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BMP3P12645 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
BMP3P12645 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
BMP3P12645 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
BMP3P12645 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
BMP3P12645 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
BMP3P12645 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BMP3P12645 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BMP3P12645 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
BMP3P12645 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BMP3P12645 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BMP3P12645 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
BMP3P12645 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BMP3P12645 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
BMP3P12645 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BMP3P12645 AC092850.2-201ENST00000623821 2697 ntBASIC17.81■□□□□ 0.44
BMP3P12645 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
BMP3P12645 TUBB1P2-201ENST00000422712 1306 ntBASIC17.81■□□□□ 0.44
BMP3P12645 TUBB1P1-201ENST00000503144 1300 ntBASIC17.81■□□□□ 0.44
BMP3P12645 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BMP3P12645 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BMP3P12645 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BMP3P12645 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BMP3P12645 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BMP3P12645 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
BMP3P12645 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BMP3P12645 FAM86MP-201ENST00000340703 885 ntBASIC17.81■□□□□ 0.44
BMP3P12645 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BMP3P12645 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BMP3P12645 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.81■□□□□ 0.44
BMP3P12645 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.81■□□□□ 0.44
BMP3P12645 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BMP3P12645 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.81■□□□□ 0.44
BMP3P12645 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.81■□□□□ 0.44
BMP3P12645 YBX1P6-201ENST00000442962 1002 ntBASIC17.81■□□□□ 0.44
BMP3P12645 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.81■□□□□ 0.44
BMP3P12645 RNA5SP486-201ENST00000515961 83 ntBASIC17.81■□□□□ 0.44
BMP3P12645 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.81■□□□□ 0.44
BMP3P12645 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.81■□□□□ 0.44
BMP3P12645 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.81■□□□□ 0.44
BMP3P12645 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.81■□□□□ 0.44
BMP3P12645 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.81■□□□□ 0.44
BMP3P12645 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.81■□□□□ 0.44
BMP3P12645 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BMP3P12645 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
BMP3P12645 LRRC59-203ENST00000576448 1531 ntBASIC17.81■□□□□ 0.44
BMP3P12645 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.81■□□□□ 0.44
BMP3P12645 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.81■□□□□ 0.44
BMP3P12645 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BMP3P12645 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BMP3P12645 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.81■□□□□ 0.44
BMP3P12645 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.81■□□□□ 0.44
BMP3P12645 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BMP3P12645 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BMP3P12645 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
BMP3P12645 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BMP3P12645 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.8■□□□□ 0.44
BMP3P12645 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.8■□□□□ 0.44
BMP3P12645 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.8■□□□□ 0.44
BMP3P12645 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BMP3P12645 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BMP3P12645 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
BMP3P12645 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
BMP3P12645 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
BMP3P12645 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BMP3P12645 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
BMP3P12645 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BMP3P12645 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BMP3P12645 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BMP3P12645 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BMP3P12645 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BMP3P12645 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BMP3P12645 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
BMP3P12645 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.8■□□□□ 0.44
BMP3P12645 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BMP3P12645 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.8■□□□□ 0.44
BMP3P12645 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BMP3P12645 AL355994.2-201ENST00000447882 704 ntBASIC17.8■□□□□ 0.44
BMP3P12645 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BMP3P12645 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms