Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 CYMP-203ENST00000474680 1263 ntBASIC14.37□□□□□ -0.11
BMP4P12644 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.37□□□□□ -0.11
BMP4P12644 AC067863.1-201ENST00000494933 530 ntBASIC14.37□□□□□ -0.11
BMP4P12644 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
BMP4P12644 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.37□□□□□ -0.11
BMP4P12644 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
BMP4P12644 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
BMP4P12644 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.37□□□□□ -0.11
BMP4P12644 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.37□□□□□ -0.11
BMP4P12644 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.37□□□□□ -0.11
BMP4P12644 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.37□□□□□ -0.11
BMP4P12644 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.37□□□□□ -0.11
BMP4P12644 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BMP4P12644 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.37□□□□□ -0.11
BMP4P12644 AC022145.2-201ENST00000598203 171 ntBASIC14.37□□□□□ -0.11
BMP4P12644 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.37□□□□□ -0.11
BMP4P12644 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
BMP4P12644 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BMP4P12644 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BMP4P12644 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BMP4P12644 KRT8P39-201ENST00000396270 1433 ntBASIC14.37□□□□□ -0.11
BMP4P12644 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BMP4P12644 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
BMP4P12644 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
BMP4P12644 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
BMP4P12644 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.37□□□□□ -0.11
BMP4P12644 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
BMP4P12644 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BMP4P12644 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BMP4P12644 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
BMP4P12644 CICP17-201ENST00000418553 2377 ntBASIC14.37□□□□□ -0.11
BMP4P12644 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.37□□□□□ -0.11
BMP4P12644 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BMP4P12644 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BMP4P12644 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
BMP4P12644 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
BMP4P12644 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.36□□□□□ -0.11
BMP4P12644 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
BMP4P12644 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.36□□□□□ -0.11
BMP4P12644 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.36□□□□□ -0.11
BMP4P12644 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.36□□□□□ -0.11
BMP4P12644 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.36□□□□□ -0.11
BMP4P12644 TFAMP1-201ENST00000412727 736 ntBASIC14.36□□□□□ -0.11
BMP4P12644 MTATP6P19-201ENST00000413797 659 ntBASIC14.36□□□□□ -0.11
BMP4P12644 AL592309.1-201ENST00000443127 649 ntBASIC14.36□□□□□ -0.11
BMP4P12644 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.36□□□□□ -0.11
BMP4P12644 FAM86GP-201ENST00000448322 971 ntBASIC14.36□□□□□ -0.11
BMP4P12644 AC090142.2-201ENST00000483263 416 ntBASIC14.36□□□□□ -0.11
BMP4P12644 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.36□□□□□ -0.11
BMP4P12644 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.36□□□□□ -0.11
BMP4P12644 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.36□□□□□ -0.11
BMP4P12644 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.36□□□□□ -0.11
BMP4P12644 AC109635.5-201ENST00000533593 962 ntBASIC14.36□□□□□ -0.11
BMP4P12644 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.36□□□□□ -0.11
BMP4P12644 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.36□□□□□ -0.11
BMP4P12644 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.36□□□□□ -0.11
BMP4P12644 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.36□□□□□ -0.11
BMP4P12644 AC011467.4-201ENST00000594891 528 ntBASIC14.36□□□□□ -0.11
BMP4P12644 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
BMP4P12644 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.36□□□□□ -0.11
BMP4P12644 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.36□□□□□ -0.11
BMP4P12644 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.36□□□□□ -0.11
BMP4P12644 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 AL928921.2-201ENST00000641325 2442 ntBASIC14.36□□□□□ -0.11
BMP4P12644 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.36□□□□□ -0.11
BMP4P12644 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
BMP4P12644 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
BMP4P12644 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
BMP4P12644 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
BMP4P12644 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
BMP4P12644 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BMP4P12644 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
BMP4P12644 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms