Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RARBP10826 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RARBP10826 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RARBP10826 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.33■□□□□ 0.36
RARBP10826 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.33■□□□□ 0.36
RARBP10826 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.33■□□□□ 0.36
RARBP10826 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.33■□□□□ 0.36
RARBP10826 UPF3AP2-201ENST00000457924 1132 ntBASIC17.33■□□□□ 0.36
RARBP10826 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.33■□□□□ 0.36
RARBP10826 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.33■□□□□ 0.36
RARBP10826 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.33■□□□□ 0.36
RARBP10826 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.33■□□□□ 0.36
RARBP10826 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.33■□□□□ 0.36
RARBP10826 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.33■□□□□ 0.36
RARBP10826 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.33■□□□□ 0.36
RARBP10826 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.33■□□□□ 0.36
RARBP10826 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RARBP10826 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.33■□□□□ 0.36
RARBP10826 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.33■□□□□ 0.36
RARBP10826 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RARBP10826 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RARBP10826 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RARBP10826 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RARBP10826 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RARBP10826 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.32■□□□□ 0.36
RARBP10826 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
RARBP10826 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RARBP10826 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.32■□□□□ 0.36
RARBP10826 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.32■□□□□ 0.36
RARBP10826 AC018735.1-201ENST00000437208 1502 ntBASIC17.32■□□□□ 0.36
RARBP10826 LRRC59-203ENST00000576448 1531 ntBASIC17.32■□□□□ 0.36
RARBP10826 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RARBP10826 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RARBP10826 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RARBP10826 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RARBP10826 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.32■□□□□ 0.36
RARBP10826 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RARBP10826 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RARBP10826 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.32■□□□□ 0.36
RARBP10826 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.32■□□□□ 0.36
RARBP10826 HSPB1P2-201ENST00000448722 546 ntBASIC17.32■□□□□ 0.36
RARBP10826 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RARBP10826 AC126915.1-201ENST00000522847 1038 ntBASIC17.32■□□□□ 0.36
RARBP10826 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.32■□□□□ 0.36
RARBP10826 MIR4313-201ENST00000580760 101 ntBASIC17.32■□□□□ 0.36
RARBP10826 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RARBP10826 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RARBP10826 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.32■□□□□ 0.36
RARBP10826 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.32■□□□□ 0.36
RARBP10826 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RARBP10826 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.32■□□□□ 0.36
RARBP10826 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RARBP10826 LINC02199-201ENST00000506655 2702 ntBASIC17.32■□□□□ 0.36
RARBP10826 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RARBP10826 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RARBP10826 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RARBP10826 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RARBP10826 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RARBP10826 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.31■□□□□ 0.36
RARBP10826 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RARBP10826 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.31■□□□□ 0.36
RARBP10826 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.31■□□□□ 0.36
RARBP10826 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RARBP10826 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RARBP10826 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.31■□□□□ 0.36
RARBP10826 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RARBP10826 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.31■□□□□ 0.36
RARBP10826 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.31■□□□□ 0.36
RARBP10826 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RARBP10826 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RARBP10826 AL023775.1-201ENST00000454907 1746 ntBASIC17.31■□□□□ 0.36
RARBP10826 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RARBP10826 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
RARBP10826 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RARBP10826 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RARBP10826 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RARBP10826 AC079178.1-201ENST00000420915 656 ntBASIC17.31■□□□□ 0.36
RARBP10826 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.31■□□□□ 0.36
RARBP10826 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.31■□□□□ 0.36
RARBP10826 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
RARBP10826 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.31■□□□□ 0.36
RARBP10826 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.31■□□□□ 0.36
RARBP10826 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RARBP10826 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.31■□□□□ 0.36
RARBP10826 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.31■□□□□ 0.36
RARBP10826 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.31■□□□□ 0.36
RARBP10826 NDUFV2P1-201ENST00000596415 907 ntBASIC17.31■□□□□ 0.36
RARBP10826 AC016629.1-201ENST00000596579 586 ntBASIC17.31■□□□□ 0.36
RARBP10826 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RARBP10826 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.31■□□□□ 0.36
RARBP10826 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RARBP10826 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
RARBP10826 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RARBP10826 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
RARBP10826 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RARBP10826 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RARBP10826 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RARBP10826 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RARBP10826 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RARBP10826 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms